RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-228	ENST00000641847	DDRGK1	Q96HY6	314 aa		11.15	□□□□□ -0.62
PHGDH-228	ENST00000641847	CDX2	Q99626	313 aa	Predicted RBP	11.15	□□□□□ -0.62
PHGDH-228	ENST00000641847	NAPB	Q9H115	298 aa		11.15	□□□□□ -0.62
PHGDH-228	ENST00000641847	MYH1	P12882	1939 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	TNFRSF10A	O00220	468 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	FGA	P02671	866 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	HSPA4	P34932	840 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	GCLC	P48506	637 aa	Predicted RBP	11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	NFIA	Q12857	509 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	ALX1	Q15699	326 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	CREB3L3	Q68CJ9	461 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	GIMAP6	Q6P9H5	292 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	TRMT44	Q8IYL2	757 aa	Known RBP	11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	TBC1D32	Q96NH3	1257 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	DCP1A	Q9NPI6	582 aa	Predicted RBP	11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	ATP8A2	Q9NTI2	1148 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	CTNNA3	Q9UI47	895 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	PALD1	Q9ULE6	856 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	AGTPBP1	Q9UPW5	1226 aa		11.14	□□□□□ -0.63
PHGDH-228	ENST00000641847	SLC27A2	O14975	620 aa		11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	PTPRA	P18433	802 aa		11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	RBM25	P49756	843 aa	Known RBP	11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	HAND2	P61296	217 aa		11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	NECTIN1	Q15223	517 aa		11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	IMMT	Q16891	758 aa	Known RBP	11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	RNF20	Q5VTR2	975 aa		11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	DDX4	Q9NQI0	724 aa	Known RBP	11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	MCM9	Q9NXL9	1143 aa		11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	SAP30BP	Q9UHR5	308 aa	Known RBP	11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	AFG3L2	Q9Y4W6	797 aa		11.13	□□□□□ -0.63
PHGDH-228	ENST00000641847	TRIM75P	A6NK02	468 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	CYP21A2	P08686	494 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	CYP2D6	P10635	497 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	PRKAR2A	P13861	404 aa	Known RBP	11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	FOSL2	P15408	326 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	PLA2G5	P39877	138 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	TJAP1	Q5JTD0	557 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	CCAR1	Q8IX12	1150 aa	Known RBP	11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	AMOTL1	Q8IY63	956 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	IDI2	Q9BXS1	227 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	SEMA6B	Q9H3T3	888 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	FAM198A	Q9UFP1	575 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	SNX14	Q9Y5W7	946 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	COL2A1	P02458	1487 aa	Predicted RBP	11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	SIPA1L1	O43166	1804 aa		11.12	□□□□□ -0.63
PHGDH-228	ENST00000641847	PFAS	O15067	1338 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	CYP2D7	A0A087X1C5	515 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	MINDY4B	A8MYZ0	360 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	USP17L12	C9JPN9	530 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	USP17L21	D6R901	530 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	ZNF213	O14771	459 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	CTNND1	O60716	968 aa	Known RBP	11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	POLR3D	P05423	398 aa	Predicted RBP	11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	ZKSCAN1	P17029	563 aa	Predicted RBP	11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	ANAPC15	P60006	121 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	PPARA	Q07869	468 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	LRRC26	Q2I0M4	334 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	CTR9	Q6PD62	1173 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	TBC1D10C	Q8IV04	446 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	RASEF	Q8IZ41	740 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	SOCS4	Q8WXH5	440 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	KCNB2	Q92953	911 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	TSHZ2	Q9NRE2	1034 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	TAF6L	Q9Y6J9	622 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	ROBO3	Q96MS0	1386 aa		11.11	□□□□□ -0.63
PHGDH-228	ENST00000641847	ENTPD3	O75355	529 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	COL6A1	P12109	1028 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	XRCC5	P13010	732 aa	Known RBP	11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	EVX2	Q03828	476 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	CTDSPL2	Q05D32	466 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	SBK1	Q52WX2	424 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	STOX1	Q6ZVD7	989 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	ZFPM1	Q8IX07	1006 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	MYLIP	Q8WY64	445 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	NUDT12	Q9BQG2	462 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	ANAPC4	Q9UJX5	808 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	MGAM	O43451	1857 aa		11.1	□□□□□ -0.63
PHGDH-228	ENST00000641847	ATRNL1	Q5VV63	1379 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	TMEM265	A0A087WTH1	108 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	PHF20L1	A8MW92	1017 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847		E7EWF7	191 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	SMIM22	K7EJ46	135 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	SLC3A2	P08195	630 aa	Known RBP	11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	CYP2B6	P20813	491 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	TRIM32	Q13049	653 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	KRT32	Q14532	448 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	MAP3K21	Q5TCX8	1036 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	C12orf60	Q5U649	245 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	SH3BP5L	Q7L8J4	393 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	STK11IP	Q8N1F8	1099 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	TRIB2	Q92519	343 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	IL17RA	Q96F46	866 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	JAKMIP1	Q96N16	626 aa	Known RBP	11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	TBC1D2	Q9BYX2	928 aa		11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	SENP6	Q9GZR1	1112 aa	Predicted RBP	11.09	□□□□□ -0.63
PHGDH-228	ENST00000641847	CWC22	Q9HCG8	908 aa	Known RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms