RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 RBPJLQ9UBG7 517 aa20.58■□□□□ 0.89
PHGDH-227ENST00000641811 HTTP42858 3142 aa20.57■□□□□ 0.88
PHGDH-227ENST00000641811 FCGRTP55899 365 aa20.57■□□□□ 0.88
PHGDH-227ENST00000641811 TFAP4Q01664 338 aa20.57■□□□□ 0.88
PHGDH-227ENST00000641811 PAGR1Q9BTK6 254 aa20.57■□□□□ 0.88
PHGDH-227ENST00000641811 MORF4L1Q9UBU8 362 aa20.57■□□□□ 0.88
PHGDH-227ENST00000641811 CLIP2Q9UDT6 1046 aa20.57■□□□□ 0.88
PHGDH-227ENST00000641811 ZMYM6O95789 1325 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 RAD21O60216 631 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 GNRH1P01148 92 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 TSPY3P0CV98 308 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 TSPY8P0CW00 308 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 CHMLP26374 656 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 NEDD1Q8NHV4 660 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 CEP95Q96GE4 821 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 TANGO6Q9C0B7 1094 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 NBPF3Q9H094 633 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 NYAP2Q9P242 653 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 SRRDQ9UH36 339 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 GABRQQ9UN88 632 aa20.56■□□□□ 0.88
PHGDH-227ENST00000641811 CENPBP07199 599 aaPredicted RBP20.55■□□□□ 0.88
PHGDH-227ENST00000641811 PRKCZQ05513 592 aa20.55■□□□□ 0.88
PHGDH-227ENST00000641811 Q3C1V9 767 aa20.55■□□□□ 0.88
PHGDH-227ENST00000641811 LPAR1Q92633 364 aa20.55■□□□□ 0.88
PHGDH-227ENST00000641811 MTMR4Q9NYA4 1195 aa20.55■□□□□ 0.88
PHGDH-227ENST00000641811 SPDYE16A6NNV3 312 aaPredicted RBP20.54■□□□□ 0.88
PHGDH-227ENST00000641811 TNPO2O14787 897 aaKnown RBP20.54■□□□□ 0.88
PHGDH-227ENST00000641811 RANBP6O60518 1105 aaKnown RBP20.54■□□□□ 0.88
PHGDH-227ENST00000641811 CNMDO75829 334 aa20.54■□□□□ 0.88
PHGDH-227ENST00000641811 GPRC5AQ8NFJ5 357 aa20.54■□□□□ 0.88
PHGDH-227ENST00000641811 GOPCQ9HD26 462 aa20.54■□□□□ 0.88
PHGDH-227ENST00000641811 TOMM22Q9NS69 142 aa20.54■□□□□ 0.88
PHGDH-227ENST00000641811 MGAMO43451 1857 aa20.54■□□□□ 0.88
PHGDH-227ENST00000641811 MYPNQ86TC9 1320 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 TSPY2A6NKD2 308 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 ORC4O43929 436 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 NMT2O60551 498 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 FGRP09769 529 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 HOXD10P28358 340 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 ERVK-9P63128 1117 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 ERVK-24P63145 666 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 COG2Q14746 738 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 RRP12Q5JTH9 1297 aaKnown RBP20.53■□□□□ 0.88
PHGDH-227ENST00000641811 SAMD1Q6SPF0 538 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-227ENST00000641811 TBC1D10CQ8IV04 446 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 NKX2-3Q8TAU0 364 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 NUP88Q99567 741 aaPredicted RBP20.53■□□□□ 0.88
PHGDH-227ENST00000641811 DSCC1Q9BVC3 393 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 BTBD7Q9P203 1132 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 PLIN4Q96Q06 1357 aa20.53■□□□□ 0.88
PHGDH-227ENST00000641811 WDR46O15213 610 aaKnown RBP20.52■□□□□ 0.88
PHGDH-227ENST00000641811 PRMT2P55345 433 aa20.52■□□□□ 0.88
PHGDH-227ENST00000641811 SOX10P56693 466 aa20.52■□□□□ 0.88
PHGDH-227ENST00000641811 FAM83BQ5T0W9 1011 aa20.52■□□□□ 0.88
PHGDH-227ENST00000641811 LRRC47Q8N1G4 583 aaKnown RBP20.52■□□□□ 0.88
PHGDH-227ENST00000641811 SH3TC2Q8TF17 1288 aa20.52■□□□□ 0.88
PHGDH-227ENST00000641811 GTF3C2Q8WUA4 911 aaPredicted RBP20.52■□□□□ 0.88
PHGDH-227ENST00000641811 IL17RBQ9NRM6 502 aa20.52■□□□□ 0.88
PHGDH-227ENST00000641811 RABGAP1Q9Y3P9 1069 aa20.52■□□□□ 0.88
PHGDH-227ENST00000641811 F5H6K3 240 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 ZNF213O14771 459 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 FLOT1O75955 427 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 TTLL1O95922 423 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 NDUFB10O96000 172 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 FLT3LGP49771 235 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 KLRC3Q07444 240 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 SLC9C1Q4G0N8 1177 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 AKNAD1Q5T1N1 836 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 LBX2Q6XYB7 198 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 RAET1EQ8TD07 263 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 RUFY2Q8WXA3 655 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 MKL1Q969V6 931 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 COA7Q96BR5 231 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 PORCNQ9H237 461 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 FBXO28Q9NVF7 368 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 HOXC10Q9NYD6 342 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 RAD50Q92878 1312 aa20.51■□□□□ 0.87
PHGDH-227ENST00000641811 DSG3P32926 999 aa20.5■□□□□ 0.87
PHGDH-227ENST00000641811 PTH1RQ03431 593 aa20.5■□□□□ 0.87
PHGDH-227ENST00000641811 MFSD6Q6ZSS7 791 aa20.5■□□□□ 0.87
PHGDH-227ENST00000641811 STAG1Q8WVM7 1258 aa20.5■□□□□ 0.87
PHGDH-227ENST00000641811 ARMC5Q96C12 935 aa20.5■□□□□ 0.87
PHGDH-227ENST00000641811 CHMP4CQ96CF2 233 aa20.5■□□□□ 0.87
PHGDH-227ENST00000641811 ATG4CQ96DT6 458 aa20.5■□□□□ 0.87
PHGDH-227ENST00000641811 RLFQ13129 1914 aa20.5■□□□□ 0.87
PHGDH-227ENST00000641811 SGSM2O43147 1006 aa20.49■□□□□ 0.87
PHGDH-227ENST00000641811 MYCP01106 439 aaPredicted RBP20.49■□□□□ 0.87
PHGDH-227ENST00000641811 STX8Q9UNK0 236 aa20.49■□□□□ 0.87
PHGDH-227ENST00000641811 NEDD4P46934 1319 aa20.49■□□□□ 0.87
PHGDH-227ENST00000641811 MYH4Q9Y623 1939 aa20.49■□□□□ 0.87
PHGDH-227ENST00000641811 GJD2Q9UKL4 321 aa20.48■□□□□ 0.87
PHGDH-227ENST00000641811 DOCK3Q8IZD9 2030 aa20.48■□□□□ 0.87
PHGDH-227ENST00000641811 ELNP15502 786 aa20.47■□□□□ 0.87
PHGDH-227ENST00000641811 MAPK4P31152 587 aa20.47■□□□□ 0.87
PHGDH-227ENST00000641811 GRK4P32298 578 aa20.47■□□□□ 0.87
PHGDH-227ENST00000641811 IMMTQ16891 758 aaKnown RBP20.47■□□□□ 0.87
PHGDH-227ENST00000641811 CCAR1Q8IX12 1150 aaKnown RBP20.47■□□□□ 0.87
PHGDH-227ENST00000641811 ZNF333Q96JL9 665 aa20.47■□□□□ 0.87
PHGDH-227ENST00000641811 CTNNA3Q9UI47 895 aa20.47■□□□□ 0.87
PHGDH-227ENST00000641811 ADCY3O60266 1144 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms