RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PLCD1P51178 756 aa19.52■□□□□ 0.71
PHGDH-211ENST00000641213 KANK3Q6NY19 840 aa19.52■□□□□ 0.71
PHGDH-211ENST00000641213 MAPKAPK5Q8IW41 473 aa19.52■□□□□ 0.71
PHGDH-211ENST00000641213 USP17L3A6NCW0 530 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 USP17L4A6NCW7 530 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 HOXA10P31260 410 aaPredicted RBP19.51■□□□□ 0.71
PHGDH-211ENST00000641213 NLRP5P59047 1200 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 DDR1Q08345 913 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 ZNF174Q15697 407 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 TTC38Q5R3I4 469 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 USP17L1Q7RTZ2 530 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 GRAMD1CQ8IYS0 662 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 FERMT2Q96AC1 680 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 TCP11L1Q9NUJ3 509 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 PODXL2Q9NZ53 605 aa19.51■□□□□ 0.71
PHGDH-211ENST00000641213 TSPY3P0CV98 308 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 TSPY8P0CW00 308 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 BTDP43251 543 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 CCDC178Q5BJE1 867 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 TMC6Q7Z403 805 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 STAG2Q8N3U4 1231 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 SLC44A5Q8NCS7 719 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 SMARCE1Q969G3 411 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 EPSTI1Q96J88 318 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 SAP30BPQ9UHR5 308 aaKnown RBP19.5■□□□□ 0.71
PHGDH-211ENST00000641213 A0A087X0B3 334 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 GPR75-ASB3A0A0A6YYF3 556 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 ADAMTS3O15072 1205 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 GTF2F1P35269 517 aaKnown RBP eCLIP19.5■□□□□ 0.71
PHGDH-211ENST00000641213 MORC3Q14149 939 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 GRM4Q14833 912 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 CERS3Q8IU89 383 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 ZNF444Q8N0Y2 327 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-211ENST00000641213 TBC1D16Q8TBP0 767 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 C16orf45Q96MC5 204 aaPredicted RBP19.5■□□□□ 0.71
PHGDH-211ENST00000641213 QTRT2Q9H974 415 aaKnown RBP19.5■□□□□ 0.71
PHGDH-211ENST00000641213 POLLQ9UGP5 575 aa19.5■□□□□ 0.71
PHGDH-211ENST00000641213 POLRMTO00411 1230 aaKnown RBP19.49■□□□□ 0.71
PHGDH-211ENST00000641213 CRAMP1Q96RY5 1269 aa19.49■□□□□ 0.71
PHGDH-211ENST00000641213 MAD2L2Q9UI95 211 aa19.49■□□□□ 0.71
PHGDH-211ENST00000641213 MYO1BO43795 1136 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 RASA1P20936 1047 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 ATP2C1P98194 919 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-211ENST00000641213 PTGDRQ13258 359 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 PIK3AP1Q6ZUJ8 805 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 SPATA20Q8TB22 786 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 SYMPKQ92797 1274 aaKnown RBP19.48■□□□□ 0.71
PHGDH-211ENST00000641213 FANCLQ9NW38 375 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 TRAPPC10P48553 1259 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 RBM10P98175 930 aaKnown RBP19.48■□□□□ 0.71
PHGDH-211ENST00000641213 TPD52L1Q16890 204 aaPredicted RBP19.48■□□□□ 0.71
PHGDH-211ENST00000641213 TRIML1Q8N9V2 468 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 MLKLQ8NB16 471 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 DPF2Q92785 391 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 DHX58Q96C10 678 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 SH3GLB2Q9NR46 395 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 MYH8P13535 1937 aa19.48■□□□□ 0.71
PHGDH-211ENST00000641213 KLRG2A4D1S0 409 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-211ENST00000641213 TRIM37O94972 964 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 UBASH3AP57075 661 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 MFSD14BQ5SR56 506 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 ARMCX5Q6P1M9 558 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 TEX11Q8IYF3 940 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 CCDC150Q8NCX0 1101 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 USP27XA6NNY8 438 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 CBFA2T2O43439 604 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 RRP9O43818 475 aaKnown RBP19.47■□□□□ 0.71
PHGDH-211ENST00000641213 SERPINC1P01008 464 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 SLFN14P0C7P3 912 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 CALML3P27482 149 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 GPKOWQ92917 476 aaPredicted RBP eCLIP19.47■□□□□ 0.71
PHGDH-211ENST00000641213 FAM163AQ96GL9 167 aaPredicted RBP19.47■□□□□ 0.71
PHGDH-211ENST00000641213 TMEM47Q9BQJ4 181 aa19.47■□□□□ 0.71
PHGDH-211ENST00000641213 SNED1Q8TER0 1413 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 VWA3AA6NCI4 1184 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 TNNT1P13805 278 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 PLCG2P16885 1265 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 GNAQP50148 359 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 ZNF827Q17R98 1081 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 SLC35G1Q2M3R5 365 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 SH3RF1Q7Z6J0 888 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 BLIDQ8IZY5 108 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 ZNF287Q9HBT7 754 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 DACH1Q9UI36 760 aa19.46■□□□□ 0.71
PHGDH-211ENST00000641213 C6orf229H3BNL8 230 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 RIOK3O14730 519 aaKnown RBP19.45■□□□□ 0.7
PHGDH-211ENST00000641213 CDK8P49336 464 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 RHBDL3P58872 404 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 FMR1Q06787 632 aaKnown RBP eCLIP19.45■□□□□ 0.73e-7■■■□□ 15
PHGDH-211ENST00000641213 HSP90AA2PQ14568 343 aaPredicted RBP19.45■□□□□ 0.7
PHGDH-211ENST00000641213 C16orf86Q6ZW13 317 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 TBC1D22AQ8WUA7 517 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 FLT1P17948 1338 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 DHX8Q14562 1220 aaKnown RBP19.45■□□□□ 0.7
PHGDH-211ENST00000641213 KRT27Q7Z3Y8 459 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 PAGE5Q96GU1 130 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 CCDC34Q96HJ3 373 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 KCND1Q9NSA2 647 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 PCDHA4Q9UN74 947 aa19.45■□□□□ 0.7
PHGDH-211ENST00000641213 STX8Q9UNK0 236 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms