RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CABP5Q9NP86 173 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 ZNF277Q9NRM2 450 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-208ENST00000641023 MTMR4Q9NYA4 1195 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 MTMR7Q9Y216 660 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 ADAMTSL1Q8N6G6 1762 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 PARP1P09874 1014 aaKnown RBP19.88■□□□□ 0.77
PHGDH-208ENST00000641023 CMA1P23946 247 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 AXDND1Q5T1B0 1012 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-208ENST00000641023 SHISA4Q96DD7 197 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 SH3GLB2Q9NR46 395 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 PI4KBQ9UBF8 816 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 CEP131Q9UPN4 1083 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 ATF5Q9Y2D1 282 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-208ENST00000641023 PCDHAC2Q9Y5I4 1007 aa19.88■□□□□ 0.77
PHGDH-208ENST00000641023 A0A1B0GVL5 298 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 AKR1B1P15121 316 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 TOB1P50616 345 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-208ENST00000641023 NLRP5P59047 1200 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 TCP10Q12799 353 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 UVSSAQ2YD98 709 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 CFAP100Q494V2 611 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 RSBN1LQ6PCB5 846 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-208ENST00000641023 CCDC17Q96LX7 622 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 KLRF2D3W0D1 207 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 SHMT1P34896 483 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 CACNB3P54284 484 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 PPP4R3BQ5MIZ7 849 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 SASS6Q6UVJ0 657 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 ZSCAN29Q8IWY8 852 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-208ENST00000641023 FMR1NBQ8N0W7 255 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-208ENST00000641023 PIBF1Q8WXW3 757 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 FAM198AQ9UFP1 575 aa19.87■□□□□ 0.77
PHGDH-208ENST00000641023 ZNF646O15015 1829 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-208ENST00000641023 KIF13BQ9NQT8 1826 aa19.86■□□□□ 0.77
PHGDH-208ENST00000641023 CALML3P27482 149 aa19.86■□□□□ 0.77
PHGDH-208ENST00000641023 SMARCA1P28370 1054 aa19.86■□□□□ 0.77
PHGDH-208ENST00000641023 ZFPM1Q8IX07 1006 aa19.86■□□□□ 0.77
PHGDH-208ENST00000641023 HDAC9Q9UKV0 1011 aa19.86■□□□□ 0.77
PHGDH-208ENST00000641023 IGKV6D-41A0A0C4DH26 115 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 TTLL1O95922 423 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 VIL1P09327 827 aaKnown RBP19.85■□□□□ 0.77
PHGDH-208ENST00000641023 NDUFA8P51970 172 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 OGFOD1Q8N543 542 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 SPZ1Q9BXG8 430 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 TRIM34Q9BYJ4 488 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 TDRD3Q9H7E2 651 aaKnown RBP19.85■□□□□ 0.77
PHGDH-208ENST00000641023 NOL7Q9UMY1 257 aaKnown RBP19.85■□□□□ 0.77
PHGDH-208ENST00000641023 CUTAO60888 179 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 RAD17O75943 681 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 GOLGA8HP0CJ92 632 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 TYRO3Q06418 890 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 DALRD3Q5D0E6 543 aaKnown RBP19.85■□□□□ 0.77
PHGDH-208ENST00000641023 FOXP4Q8IVH2 680 aaPredicted RBP19.85■□□□□ 0.77
PHGDH-208ENST00000641023 PRMT6Q96LA8 375 aaPredicted RBP19.85■□□□□ 0.77
PHGDH-208ENST00000641023 PPP1R9BQ96SB3 815 aa19.85■□□□□ 0.77
PHGDH-208ENST00000641023 PSMD14O00487 310 aa19.84■□□□□ 0.77
PHGDH-208ENST00000641023 CYTH3O43739 400 aa19.84■□□□□ 0.77
PHGDH-208ENST00000641023 ENTPD3O75355 529 aa19.84■□□□□ 0.77
PHGDH-208ENST00000641023 USP17L2Q6R6M4 530 aa19.84■□□□□ 0.77
PHGDH-208ENST00000641023 NIM1KQ8IY84 436 aa19.84■□□□□ 0.77
PHGDH-208ENST00000641023 FAM177A1Q8N128 213 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-208ENST00000641023 KRI1Q8N9T8 703 aaKnown RBP19.84■□□□□ 0.77
PHGDH-208ENST00000641023 SDF4Q9BRK5 362 aa19.84■□□□□ 0.77
PHGDH-208ENST00000641023 ZNRF3Q9ULT6 936 aa19.84■□□□□ 0.77
PHGDH-208ENST00000641023 DDTLA6NHG4 134 aaPredicted RBP19.83■□□□□ 0.77
PHGDH-208ENST00000641023 MPHOSPH10O00566 681 aaKnown RBP19.83■□□□□ 0.77
PHGDH-208ENST00000641023 NPY5RQ15761 445 aa19.83■□□□□ 0.77
PHGDH-208ENST00000641023 CCDC148Q8NFR7 591 aa19.83■□□□□ 0.77
PHGDH-208ENST00000641023 CLIP2Q9UDT6 1046 aa19.83■□□□□ 0.77
PHGDH-208ENST00000641023 PCDHB6Q9Y5E3 794 aa19.83■□□□□ 0.77
PHGDH-208ENST00000641023 BAZ2BQ9UIF8 2168 aaKnown RBP19.83■□□□□ 0.76
PHGDH-208ENST00000641023 TRIM75PA6NK02 468 aa19.83■□□□□ 0.76
PHGDH-208ENST00000641023 TNFRSF25Q93038 417 aa19.83■□□□□ 0.76
PHGDH-208ENST00000641023 TMOD2Q9NZR1 351 aa19.83■□□□□ 0.76
PHGDH-208ENST00000641023 BMP15O95972 392 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 PDHBP11177 359 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 VEGFAP15692 232 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-208ENST00000641023 PFKFB1P16118 471 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 ATP2B1P20020 1258 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 GALNT17Q6IS24 598 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 TRIM44Q96DX7 344 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-208ENST00000641023 MRVI1Q9Y6F6 885 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 MYH8P13535 1937 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 ZNF202O95125 648 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 EIF6P56537 245 aaKnown RBP19.82■□□□□ 0.76
PHGDH-208ENST00000641023 SHC4Q6S5L8 630 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 FAM200AQ8TCP9 573 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 GPKOWQ92917 476 aaPredicted RBP eCLIP19.82■□□□□ 0.76
PHGDH-208ENST00000641023 RRP36Q96EU6 259 aaKnown RBP19.82■□□□□ 0.76
PHGDH-208ENST00000641023 BARHL2Q9NY43 387 aa19.82■□□□□ 0.76
PHGDH-208ENST00000641023 PPP1R1BQ9UD71 204 aaPredicted RBP19.82■□□□□ 0.76
PHGDH-208ENST00000641023 USP17L5A8MUK1 530 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 CAVIN2O95810 425 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 PTPREP23469 700 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 TRAPPC10P48553 1259 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 DLGAP5Q15398 846 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 CERKLQ49MI3 558 aaPredicted RBP19.81■□□□□ 0.76
PHGDH-208ENST00000641023 ASPRV1Q53RT3 343 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 RESP18Q5W5W9 173 aa19.81■□□□□ 0.76
PHGDH-208ENST00000641023 SH3BP5LQ7L8J4 393 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms