RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 PPP6R2O75170 966 aa15.48■□□□□ 0.07
SCARB2-227ENST00000640957 ATP6V1AP38606 617 aa15.48■□□□□ 0.07
SCARB2-227ENST00000640957 NOSTRINQ8IVI9 506 aa15.48■□□□□ 0.07
SCARB2-227ENST00000640957 OTUD6BQ8N6M0 293 aa15.48■□□□□ 0.07
SCARB2-227ENST00000640957 EPN1Q9Y6I3 576 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-227ENST00000640957 ZSCAN5CA6NGD5 496 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-227ENST00000640957 SMIM22K7EJ46 135 aa15.47■□□□□ 0.07
SCARB2-227ENST00000640957 WHAMMP3Q1A5X7 153 aa15.47■□□□□ 0.07
SCARB2-227ENST00000640957 EARS2Q5JPH6 523 aaKnown RBP15.47■□□□□ 0.07
SCARB2-227ENST00000640957 GBP6Q6ZN66 633 aa15.47■□□□□ 0.07
SCARB2-227ENST00000640957 ZCRB1Q8TBF4 217 aaKnown RBP15.47■□□□□ 0.07
SCARB2-227ENST00000640957 LRRC1Q9BTT6 524 aa15.47■□□□□ 0.07
SCARB2-227ENST00000640957 RPS6KA5O75582 802 aa15.47■□□□□ 0.07
SCARB2-227ENST00000640957 HPDP32754 393 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-227ENST00000640957 METTL24Q5JXM2 366 aa15.47■□□□□ 0.07
SCARB2-227ENST00000640957 FBXO2Q9UK22 296 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-227ENST00000640957 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.47■□□□□ 0.07
SCARB2-227ENST00000640957 GDAQ9Y2T3 454 aa15.47■□□□□ 0.07
SCARB2-227ENST00000640957 RPSAP08865 295 aaKnown RBP15.46■□□□□ 0.07
SCARB2-227ENST00000640957 IDEP14735 1019 aa15.46■□□□□ 0.07
SCARB2-227ENST00000640957 GUCY2FP51841 1108 aa15.46■□□□□ 0.07
SCARB2-227ENST00000640957 TSEN2Q8NCE0 465 aaKnown RBP15.46■□□□□ 0.07
SCARB2-227ENST00000640957 IFT81Q8WYA0 676 aa15.46■□□□□ 0.07
SCARB2-227ENST00000640957 IQSEC3Q9UPP2 1182 aaPredicted RBP15.46■□□□□ 0.07
SCARB2-227ENST00000640957 CEP83Q9Y592 693 aa15.46■□□□□ 0.07
SCARB2-227ENST00000640957 ABCC6O95255 1503 aa15.46■□□□□ 0.07
SCARB2-227ENST00000640957 TTC26A0AVF1 554 aa15.46■□□□□ 0.07
SCARB2-227ENST00000640957 AMPD2Q01433 879 aa15.46■□□□□ 0.07
SCARB2-227ENST00000640957 PPP2R5AQ15172 486 aa15.46■□□□□ 0.07
SCARB2-227ENST00000640957 TTF2Q9UNY4 1162 aaKnown RBP15.46■□□□□ 0.07
SCARB2-227ENST00000640957 TBC1D2BQ9UPU7 963 aa15.46■□□□□ 0.07
SCARB2-227ENST00000640957 PIK3C2AO00443 1686 aa15.46■□□□□ 0.06
SCARB2-227ENST00000640957 NCK2O43639 380 aa15.46■□□□□ 0.06
SCARB2-227ENST00000640957 NDUFA10O95299 355 aa15.46■□□□□ 0.06
SCARB2-227ENST00000640957 SSRP1Q08945 709 aaKnown RBP15.46■□□□□ 0.06
SCARB2-227ENST00000640957 SAFBQ15424 915 aaKnown RBP eCLIP15.46■□□□□ 0.06
SCARB2-227ENST00000640957 SPATA1Q5VX52 437 aa15.46■□□□□ 0.06
SCARB2-227ENST00000640957 ACTN4O43707 911 aaKnown RBP15.45■□□□□ 0.06
SCARB2-227ENST00000640957 KIAA0754O94854 1291 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 IFT88Q13099 833 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 CNGA4Q8IV77 575 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 PLBD2Q8NHP8 589 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 GIMAP7Q8NHV1 300 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
SCARB2-227ENST00000640957 SCLT1Q96NL6 688 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 RUFY1Q96T51 708 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 SLC12A7Q9Y666 1083 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 LDHAL6AQ6ZMR3 332 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 XAGE2Q96GT9 111 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 AGPAT5Q9NUQ2 364 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 DACH1Q9UI36 760 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 ZC3H4Q9UPT8 1303 aaKnown RBP15.45■□□□□ 0.06
SCARB2-227ENST00000640957 ANKARQ7Z5J8 1434 aa15.45■□□□□ 0.06
SCARB2-227ENST00000640957 EIF4E1BA6NMX2 242 aaKnown RBP15.44■□□□□ 0.06
SCARB2-227ENST00000640957 NBPF26B4DH59 902 aa15.44■□□□□ 0.06
SCARB2-227ENST00000640957 PATL2C9JE40 543 aaKnown RBP15.44■□□□□ 0.06
SCARB2-227ENST00000640957 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-227ENST00000640957 NBPF14Q5TI25 921 aa15.44■□□□□ 0.06
SCARB2-227ENST00000640957 NBPF10Q6P3W6 841 aaKnown RBP15.44■□□□□ 0.06
SCARB2-227ENST00000640957 NBPF15Q8N660 670 aa15.44■□□□□ 0.06
SCARB2-227ENST00000640957 ENOX2Q16206 610 aaKnown RBP15.44■□□□□ 0.06
SCARB2-227ENST00000640957 CYP26C1Q6V0L0 522 aa15.44■□□□□ 0.06
SCARB2-227ENST00000640957 PPANQ9NQ55 473 aaKnown RBP15.44■□□□□ 0.06
SCARB2-227ENST00000640957 FAM217BQ9NTX9 383 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-227ENST00000640957 ZMYM6O95789 1325 aa15.44■□□□□ 0.06
SCARB2-227ENST00000640957 PLEKP08567 350 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-227ENST00000640957 CCNI2Q6ZMN8 369 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-227ENST00000640957 PAGE5Q96GU1 130 aa15.44■□□□□ 0.06
SCARB2-227ENST00000640957 ASAP1Q9ULH1 1129 aa15.44■□□□□ 0.06
SCARB2-227ENST00000640957 CDC25CP30307 473 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 NAP1L1P55209 391 aaKnown RBP15.43■□□□□ 0.06
SCARB2-227ENST00000640957 IFIT5Q13325 482 aaKnown RBP15.43■□□□□ 0.06
SCARB2-227ENST00000640957 TRADDQ15628 312 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 TMTC1Q8IUR5 882 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 DNAJC10Q8IXB1 793 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 N4BP2L2Q92802 583 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-227ENST00000640957 MLXIPQ9HAP2 919 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 CRYBG1Q9Y4K1 1723 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 NCAPD2Q15021 1401 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 MYH8P13535 1937 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 NKRFO15226 690 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCARB2-227ENST00000640957 PDHBP11177 359 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 PTPREP23469 700 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 HERVK_113P62684 666 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 CUL4BQ13620 913 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 SUGP1Q8IWZ8 645 aaKnown RBP15.43■□□□□ 0.06
SCARB2-227ENST00000640957 TMOD3Q9NYL9 352 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 ZSWIM5Q9P217 1185 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 MTMR7Q9Y216 660 aa15.43■□□□□ 0.06
SCARB2-227ENST00000640957 GOLGB1Q14789 3259 aaKnown RBP15.43■□□□□ 0.06
SCARB2-227ENST00000640957 EYA2O00167 538 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 ADAMTS2O95450 1211 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 SARSP49591 514 aaKnown RBP15.42■□□□□ 0.06
SCARB2-227ENST00000640957 SLC4A8Q2Y0W8 1093 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 TTMPQ5BVD1 217 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 TRAPPC11Q7Z392 1133 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 RASSF8Q8NHQ8 419 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 MS4A14Q96JA4 679 aa15.42■□□□□ 0.06
SCARB2-227ENST00000640957 CHD2O14647 1828 aaKnown RBP15.42■□□□□ 0.06
SCARB2-227ENST00000640957 RDXP35241 583 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms