RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 ZKSCAN4Q969J2 545 aaPredicted RBP10.24□□□□□ -0.77
HLA-B-258ENST00000640615 PICK1Q9NRD5 415 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 GINM1Q9NU53 330 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.24□□□□□ -0.77
HLA-B-258ENST00000640615 NYAP2Q9P242 653 aa10.24□□□□□ -0.77
HLA-B-258ENST00000640615 SSC5DA1L4H1 1573 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 CPLX1O14810 134 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 RAD21O60216 631 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 DHX16O60231 1041 aaKnown RBP10.23□□□□□ -0.77
HLA-B-258ENST00000640615 MAP3K9P80192 1104 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 FMR1Q06787 632 aaKnown RBP eCLIP10.23□□□□□ -0.77
HLA-B-258ENST00000640615 ST3GAL1Q11201 340 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 TROAPQ12815 778 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 ARMC9Q7Z3E5 817 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 CCDC84Q86UT8 332 aaPredicted RBP10.23□□□□□ -0.77
HLA-B-258ENST00000640615 SIAH1Q8IUQ4 282 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 FANCBQ8NB91 859 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.23□□□□□ -0.771e-6■□□□□ 9.4
HLA-B-258ENST00000640615 CTCFLQ8NI51 663 aaPredicted RBP10.23□□□□□ -0.77
HLA-B-258ENST00000640615 MKL1Q969V6 931 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 ZNF408Q9H9D4 720 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 ARHGEF10LQ9HCE6 1279 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 PRDM10Q9NQV6 1147 aa10.23□□□□□ -0.77
HLA-B-258ENST00000640615 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.23□□□□□ -0.77
HLA-B-258ENST00000640615 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.23□□□□□ -0.77
HLA-B-258ENST00000640615 CCDC196A0A1B0GTZ2 297 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 RASSF10A6NK89 507 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 TMEM88BA6NKF7 163 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 USP17L5A8MUK1 530 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 DTNBO60941 627 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 CDC27P30260 824 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 ADD1P35611 737 aaKnown RBP10.22□□□□□ -0.77
HLA-B-258ENST00000640615 RCAN1P53805 252 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 CPLX2Q6PUV4 134 aaKnown RBP10.22□□□□□ -0.77
HLA-B-258ENST00000640615 MOB2Q70IA6 237 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 ACER1Q8TDN7 264 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 INTS4Q96HW7 963 aaKnown RBP10.22□□□□□ -0.77
HLA-B-258ENST00000640615 RBM28Q9NW13 759 aaKnown RBP10.22□□□□□ -0.77
HLA-B-258ENST00000640615 SMC3Q9UQE7 1217 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 CSADQ9Y600 493 aa10.22□□□□□ -0.77
HLA-B-258ENST00000640615 A0A1W2PRG0 241 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 F5H6K3 240 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 FOXN1O15353 648 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 PPFIA3O75145 1194 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 CDKL5O76039 1030 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 PARP1P09874 1014 aaKnown RBP10.21□□□□□ -0.77
HLA-B-258ENST00000640615 PTPRAP18433 802 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 KIF5BP33176 963 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 ECE1P42892 770 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 VEGFBP49765 207 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 KLRC3Q07444 240 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 VGLL4Q14135 290 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 GRM4Q14833 912 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 PPP2R5BQ15173 497 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 NOL9Q5SY16 702 aaKnown RBP10.21□□□□□ -0.77
HLA-B-258ENST00000640615 SLFN13Q68D06 897 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 USP17L2Q6R6M4 530 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.21□□□□□ -0.77
HLA-B-258ENST00000640615 ANKRD13AQ8IZ07 590 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 DDX11Q96FC9 970 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 MAP3K14Q99558 947 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 FEZ1Q99689 392 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 LLPHQ9BRT6 129 aaKnown RBP10.21□□□□□ -0.77
HLA-B-258ENST00000640615 SH2D4AQ9H788 454 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 AS3MTQ9HBK9 375 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 FAM217BQ9NTX9 383 aaPredicted RBP10.21□□□□□ -0.77
HLA-B-258ENST00000640615 WBP1LQ9NX94 342 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 ISY1Q9ULR0 285 aaKnown RBP10.21□□□□□ -0.77
HLA-B-258ENST00000640615 TMX2Q9Y320 296 aa10.21□□□□□ -0.77
HLA-B-258ENST00000640615 PTPDC1A2A3K4 754 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 UBE2Q2LH0YL09 131 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 JAK2O60674 1132 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 CELF2O95319 508 aaKnown RBP10.2□□□□□ -0.78
HLA-B-258ENST00000640615 PLEKHA8P1O95397 391 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 CTDNEP1O95476 244 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 GOLGA8HP0CJ92 632 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 PDHBP11177 359 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 GJB2P29033 226 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 GNAQP50148 359 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 SPP2Q13103 211 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 ZYXQ15942 572 aaKnown RBP10.2□□□□□ -0.78
HLA-B-258ENST00000640615 CCDC96Q2M329 555 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 FRMPD2Q68DX3 1309 aaPredicted RBP10.2□□□□□ -0.78
HLA-B-258ENST00000640615 RASGRP2Q7LDG7 609 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 CMTR1Q8N1G2 835 aaKnown RBP10.2□□□□□ -0.78
HLA-B-258ENST00000640615 STAG2Q8N3U4 1231 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 CCDC82Q8N4S0 544 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 FAM184AQ8NB25 1140 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 NSUN7Q8NE18 718 aaKnown RBP10.2□□□□□ -0.78
HLA-B-258ENST00000640615 GMCL1P1Q8NEA9 526 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 ELP3Q9H9T3 547 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
HLA-B-258ENST00000640615 GOPCQ9HD26 462 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 MAD2L2Q9UI95 211 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 SYNPO2Q9UMS6 1093 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 ZHX2Q9Y6X8 837 aa10.2□□□□□ -0.78
HLA-B-258ENST00000640615 NID2Q14112 1375 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
HLA-B-258ENST00000640615 TRIM75PA6NK02 468 aa10.19□□□□□ -0.78
HLA-B-258ENST00000640615 NDUFB10O96000 172 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms