RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 CAPNS2Q96L46 248 aa25.31■■□□□ 1.64
TSPAN9-208ENST00000640568 TMEM47Q9BQJ4 181 aa25.31■■□□□ 1.64
TSPAN9-208ENST00000640568 TMOD4Q9NZQ9 345 aa25.31■■□□□ 1.64
TSPAN9-208ENST00000640568 SH2B2O14492 632 aaPredicted RBP25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 NOVP48745 357 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 SEC23AQ15436 765 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 RCSD1Q6JBY9 416 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 Q6ZUG5 572 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 TMTC2Q8N394 836 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 IGDCC4Q8TDY8 1250 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 KIAA1683Q9H0B3 1180 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 PDRG1Q9NUG6 133 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 SYNPO2Q9UMS6 1093 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 LOC285556D6RIA3 1793 aa25.3■■□□□ 1.64
TSPAN9-208ENST00000640568 CCDC69A6NI79 296 aa25.29■■□□□ 1.64
TSPAN9-208ENST00000640568 HMGCS2P54868 508 aa25.29■■□□□ 1.64
TSPAN9-208ENST00000640568 ANKS1AQ92625 1134 aa25.29■■□□□ 1.64
TSPAN9-208ENST00000640568 MTMR7Q9Y216 660 aa25.29■■□□□ 1.64
TSPAN9-208ENST00000640568 A0A0G2JLL6 359 aaPredicted RBP25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 FAM155AB1AL88 458 aaPredicted RBP25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 CETPP11597 493 aa25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 NOGQ13253 232 aa25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 GADL1Q6ZQY3 521 aa25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 PRRT2Q7Z6L0 340 aaPredicted RBP25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 VCPKMTQ9H867 229 aa25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 LY9Q9HBG7 655 aa25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 MANSC4A6NHS7 340 aaPredicted RBP25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 LIFRP42702 1097 aa25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 NEK4P51957 841 aa25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 RABEP1Q15276 862 aa25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 FASTKD5Q7L8L6 764 aaKnown RBP25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 PNMA1Q8ND90 353 aa25.28■■□□□ 1.64
TSPAN9-208ENST00000640568 CCL15-CCL14A0A0B4J2E2 113 aa25.27■■□□□ 1.64
TSPAN9-208ENST00000640568 CCL15Q16663 113 aa25.27■■□□□ 1.64
TSPAN9-208ENST00000640568 SH3D19Q5HYK7 790 aa25.27■■□□□ 1.64
TSPAN9-208ENST00000640568 CATIPQ7Z7H3 387 aa25.27■■□□□ 1.64
TSPAN9-208ENST00000640568 LPAR1Q92633 364 aa25.27■■□□□ 1.64
TSPAN9-208ENST00000640568 KIF2CQ99661 725 aa25.27■■□□□ 1.64
TSPAN9-208ENST00000640568 GPHNQ9NQX3 736 aaPredicted RBP25.27■■□□□ 1.64
TSPAN9-208ENST00000640568 WDR33Q9C0J8 1336 aaKnown RBP25.26■■□□□ 1.63
TSPAN9-208ENST00000640568 F5H6K3 240 aa25.26■■□□□ 1.63
TSPAN9-208ENST00000640568 KLRC3Q07444 240 aa25.26■■□□□ 1.63
TSPAN9-208ENST00000640568 SLFN13Q68D06 897 aa25.26■■□□□ 1.63
TSPAN9-208ENST00000640568 SYNE3Q6ZMZ3 975 aa25.26■■□□□ 1.63
TSPAN9-208ENST00000640568 PROCA1Q8NCQ7 364 aaPredicted RBP25.26■■□□□ 1.63
TSPAN9-208ENST00000640568 GMCL1P1Q8NEA9 526 aa25.26■■□□□ 1.63
TSPAN9-208ENST00000640568 ISY1Q9ULR0 285 aaKnown RBP25.26■■□□□ 1.63
TSPAN9-208ENST00000640568 SREBF2Q12772 1141 aa25.25■■□□□ 1.63
TSPAN9-208ENST00000640568 DGKZQ13574 1117 aa25.25■■□□□ 1.63
TSPAN9-208ENST00000640568 SPICE1Q8N0Z3 855 aa25.25■■□□□ 1.63
TSPAN9-208ENST00000640568 BRF1Q92994 677 aa25.25■■□□□ 1.63
TSPAN9-208ENST00000640568 MS4A4AQ96JQ5 239 aa25.25■■□□□ 1.63
TSPAN9-208ENST00000640568 C12orf42Q96LP6 360 aa25.25■■□□□ 1.63
TSPAN9-208ENST00000640568 SENP2Q9HC62 589 aa25.25■■□□□ 1.63
TSPAN9-208ENST00000640568 EMILIN3Q9NT22 766 aa25.25■■□□□ 1.63
TSPAN9-208ENST00000640568 NAP1L2Q9ULW6 460 aaPredicted RBP25.25■■□□□ 1.63
TSPAN9-208ENST00000640568 NDUFB10O96000 172 aa25.24■■□□□ 1.63
TSPAN9-208ENST00000640568 ANKRD1Q15327 319 aa25.24■■□□□ 1.63
TSPAN9-208ENST00000640568 CHMP4CQ96CF2 233 aa25.24■■□□□ 1.63
TSPAN9-208ENST00000640568 SLC12A7Q9Y666 1083 aa25.24■■□□□ 1.63
TSPAN9-208ENST00000640568 AOC2O75106 756 aa25.23■■□□□ 1.63
TSPAN9-208ENST00000640568 VEGFBP49765 207 aa25.23■■□□□ 1.63
TSPAN9-208ENST00000640568 INHBEP58166 350 aa25.23■■□□□ 1.63
TSPAN9-208ENST00000640568 KIF23Q02241 960 aaPredicted RBP25.23■■□□□ 1.63
TSPAN9-208ENST00000640568 SGMS1Q86VZ5 419 aa25.23■■□□□ 1.63
TSPAN9-208ENST00000640568 FBXL16Q8N461 479 aa25.23■■□□□ 1.63
TSPAN9-208ENST00000640568 WDR46O15213 610 aaKnown RBP25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 ST18O60284 1047 aa25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 VCAM1P19320 739 aa25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 SLC1A4P43007 532 aa25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 CCDC96Q2M329 555 aa25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 ZNF654Q8IZM8 581 aa25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 NUP133Q8WUM0 1156 aa25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 DCAF4Q8WV16 495 aa25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 BRI3BPQ8WY22 251 aa25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 AGXT2Q9BYV1 514 aa25.22■■□□□ 1.63
TSPAN9-208ENST00000640568 KLF18A0A0U1RQI7 1052 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 APOBRQ0VD83 1088 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 PABPC4Q13310 644 aaKnown RBP eCLIP25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 REM2Q8IYK8 340 aaPredicted RBP25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 IL27Q8NEV9 243 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 AGTPBP1Q9UPW5 1226 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 DDAH1O94760 285 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 CALM1P0DP23 149 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 CALM2P0DP24 149 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 CALM3P0DP25 149 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 PDHBP11177 359 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 BMP3P12645 472 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 AK2P54819 239 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 TOB2Q14106 344 aaPredicted RBP25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 KIAA1755Q5JYT7 1200 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 OTUD7BQ6GQQ9 843 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 GMCL1Q96IK5 515 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 TANGO6Q9C0B7 1094 aa25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 ALDH8A1Q9H2A2 487 aaPredicted RBP25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 RPAP3Q9H6T3 665 aaPredicted RBP25.21■■□□□ 1.63
TSPAN9-208ENST00000640568 TESPA1A2RU30 521 aaPredicted RBP25.2■■□□□ 1.62
TSPAN9-208ENST00000640568 MAP2K2P36507 400 aa25.2■■□□□ 1.62
TSPAN9-208ENST00000640568 FAM83BQ5T0W9 1011 aa25.2■■□□□ 1.62
TSPAN9-208ENST00000640568 TREML2Q5T2D2 321 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms