RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 ZSWIM4Q9H7M6 989 aa15.86■□□□□ 0.13
SPIN3-239ENST00000640463 CCT6AP40227 531 aaKnown RBP15.85■□□□□ 0.13
SPIN3-239ENST00000640463 CAVIN4Q5BKX8 364 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 RAD9BQ6WBX8 426 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 SH3RF1Q7Z6J0 888 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 TFCP2L1Q9NZI6 479 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 CTNND2Q9UQB3 1225 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 CACNA1SQ13698 1873 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 PPP1R3GB7ZBB8 358 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 KCNQ2O43526 872 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 CDC25AP30304 524 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 TMTC3Q6ZXV5 915 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 MARCH10Q8NA82 808 aaPredicted RBP15.85■□□□□ 0.13
SPIN3-239ENST00000640463 KIFC2Q96AC6 838 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 MINPP1Q9UNW1 487 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 MCM7P33993 719 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 MAP3K9P80192 1104 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 TMCO3Q6UWJ1 677 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 PPFIBP1Q86W92 1011 aa15.85■□□□□ 0.13
SPIN3-239ENST00000640463 CCDC12Q8WUD4 166 aaPredicted RBP15.85■□□□□ 0.13
SPIN3-239ENST00000640463 DUOX1Q9NRD9 1551 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 EFCAB8A8MWE9 144 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 PPP2R3AQ06190 1150 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 TNFRSF25Q93038 417 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 SRRTQ9BXP5 876 aaKnown RBP15.84■□□□□ 0.13
SPIN3-239ENST00000640463 BRMS1Q9HCU9 246 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 MAPK8IP1Q9UQF2 711 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 CNTNAP5Q8WYK1 1306 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 CASP14P31944 242 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 PLA2G4AP47712 749 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 NLRP5P59047 1200 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 RBM28Q9NW13 759 aaKnown RBP15.84■□□□□ 0.13
SPIN3-239ENST00000640463 ADD3Q9UEY8 706 aaKnown RBP15.84■□□□□ 0.13
SPIN3-239ENST00000640463 MRFAP1Q9Y605 127 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 XDHP47989 1333 aa15.84■□□□□ 0.13
SPIN3-239ENST00000640463 GTF2E1P29083 439 aaPredicted RBP15.83■□□□□ 0.13
SPIN3-239ENST00000640463 PPP2R5BQ15173 497 aa15.83■□□□□ 0.13
SPIN3-239ENST00000640463 IL17AQ16552 155 aa15.83■□□□□ 0.13
SPIN3-239ENST00000640463 FERMT2Q96AC1 680 aa15.83■□□□□ 0.13
SPIN3-239ENST00000640463 CCDC34Q96HJ3 373 aa15.83■□□□□ 0.13
SPIN3-239ENST00000640463 BRIP1Q9BX63 1249 aa15.83■□□□□ 0.13
SPIN3-239ENST00000640463 MYH8P13535 1937 aa15.83■□□□□ 0.13
SPIN3-239ENST00000640463 GOLGA6L9A6NEM1 432 aa15.83■□□□□ 0.12
SPIN3-239ENST00000640463 MECOMQ03112 1051 aa15.83■□□□□ 0.12
SPIN3-239ENST00000640463 UBE4AQ14139 1066 aa15.83■□□□□ 0.12
SPIN3-239ENST00000640463 CTCFLQ8NI51 663 aaPredicted RBP15.83■□□□□ 0.12
SPIN3-239ENST00000640463 ARGLU1Q9NWB6 273 aaPredicted RBP15.83■□□□□ 0.12
SPIN3-239ENST00000640463 ZRANB2O95218 330 aaKnown RBP eCLIP15.83■□□□□ 0.12
SPIN3-239ENST00000640463 CCDC175P0C221 793 aa15.83■□□□□ 0.12
SPIN3-239ENST00000640463 CDKAL1Q5VV42 579 aa15.83■□□□□ 0.12
SPIN3-239ENST00000640463 RRAGBQ5VZM2 374 aa15.83■□□□□ 0.12
SPIN3-239ENST00000640463 NSUN4Q96CB9 384 aaKnown RBP15.83■□□□□ 0.12
SPIN3-239ENST00000640463 MTRQ99707 1265 aa15.83■□□□□ 0.12
SPIN3-239ENST00000640463 MTMR7Q9Y216 660 aa15.83■□□□□ 0.12
SPIN3-239ENST00000640463 PRDX5P30044 214 aa15.82■□□□□ 0.12
SPIN3-239ENST00000640463 FXR1P51114 621 aaKnown RBP eCLIP15.82■□□□□ 0.12
SPIN3-239ENST00000640463 ZBTB9Q96C00 473 aa15.82■□□□□ 0.12
SPIN3-239ENST00000640463 GSDMAQ96QA5 445 aa15.82■□□□□ 0.12
SPIN3-239ENST00000640463 VPS16Q9H269 839 aa15.82■□□□□ 0.12
SPIN3-239ENST00000640463 BSDC1Q9NW68 430 aaPredicted RBP15.82■□□□□ 0.12
SPIN3-239ENST00000640463 ADGRG1Q9Y653 693 aa15.82■□□□□ 0.12
SPIN3-239ENST00000640463 ERICH4A6NGS2 130 aa15.82■□□□□ 0.12
SPIN3-239ENST00000640463 ATP2C1P98194 919 aaPredicted RBP15.82■□□□□ 0.12
SPIN3-239ENST00000640463 RASGRP4Q8TDF6 673 aa15.82■□□□□ 0.12
SPIN3-239ENST00000640463 DCP1AQ9NPI6 582 aaPredicted RBP15.82■□□□□ 0.12
SPIN3-239ENST00000640463 COL14A1Q05707 1796 aaKnown RBP15.82■□□□□ 0.12
SPIN3-239ENST00000640463 ABL1P00519 1130 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 GPKOWQ92917 476 aaPredicted RBP eCLIP15.81■□□□□ 0.12
SPIN3-239ENST00000640463 PANX2Q96RD6 677 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 NOL10Q9BSC4 688 aaKnown RBP15.81■□□□□ 0.12
SPIN3-239ENST00000640463 RNF225M0QZC1 329 aaPredicted RBP15.81■□□□□ 0.12
SPIN3-239ENST00000640463 TFRCP02786 760 aaKnown RBP15.81■□□□□ 0.12
SPIN3-239ENST00000640463 GYPCP04921 128 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 CALM1P0DP23 149 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 CALM2P0DP24 149 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 CALM3P0DP25 149 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 PBX1P40424 430 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 POLR3GO15318 223 aaPredicted RBP15.81■□□□□ 0.12
SPIN3-239ENST00000640463 MFAP3LO75121 409 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 SCG2P13521 617 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 E2F4Q16254 413 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 ACRBPQ8NEB7 543 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 ZNF652Q9Y2D9 606 aa15.81■□□□□ 0.12
SPIN3-239ENST00000640463 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.81■□□□□ 0.12
SPIN3-239ENST00000640463 TSPY2A6NKD2 308 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 SASH3O75995 380 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 DDAH1O94760 285 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 KRT31Q15323 416 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 FILIP1LQ4L180 1135 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 SLC51AQ86UW1 340 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 IQUBQ8NA54 791 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 TAB2Q9NYJ8 693 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 PUF60Q9UHX1 559 aaKnown RBP15.8■□□□□ 0.12
SPIN3-239ENST00000640463 N4BP3O15049 544 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 FGRP09769 529 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 PDXDC2PQ6P474 469 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
SPIN3-239ENST00000640463 GDAQ9Y2T3 454 aa15.8■□□□□ 0.12
SPIN3-239ENST00000640463 USP17L8P0C7I0 530 aa15.79■□□□□ 0.12
SPIN3-239ENST00000640463 PLIN2Q99541 437 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms