RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 SHISA3A0PJX4 238 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 UBOX5O94941 541 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 ATE1O95260 518 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 RECKO95980 971 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 SRFP11831 508 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 LTKP29376 864 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 HK2P52789 917 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 KRTAP19-1Q8IUB9 90 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 NT5C1AQ9BXI3 368 aa8.31□□□□□ -1.08
CCDC7-216ENST00000640058 AFMP43652 599 aa8.3□□□□□ -1.08
CCDC7-216ENST00000640058 ZNF165P49910 485 aa8.3□□□□□ -1.08
CCDC7-216ENST00000640058 EGR3Q06889 387 aa8.3□□□□□ -1.08
CCDC7-216ENST00000640058 GAB4Q2WGN9 574 aa8.3□□□□□ -1.08
CCDC7-216ENST00000640058 TSPYL5Q86VY4 417 aaPredicted RBP8.3□□□□□ -1.08
CCDC7-216ENST00000640058 RNF34Q969K3 372 aa8.3□□□□□ -1.08
CCDC7-216ENST00000640058 ATG4CQ96DT6 458 aa8.3□□□□□ -1.08
CCDC7-216ENST00000640058 KIRREL1Q96J84 757 aa8.3□□□□□ -1.08
CCDC7-216ENST00000640058 ZNF512BQ96KM6 892 aaPredicted RBP8.3□□□□□ -1.08
CCDC7-216ENST00000640058 EHMT1Q9H9B1 1298 aa8.3□□□□□ -1.08
CCDC7-216ENST00000640058 GDNFP39905 211 aa8.29□□□□□ -1.08
CCDC7-216ENST00000640058 CLEC16AQ2KHT3 1053 aa8.29□□□□□ -1.08
CCDC7-216ENST00000640058 NLRC3Q7RTR2 1065 aa8.29□□□□□ -1.08
CCDC7-216ENST00000640058 SLITRK4Q8IW52 837 aa8.29□□□□□ -1.08
CCDC7-216ENST00000640058 METTL5Q9NRN9 209 aaKnown RBP8.29□□□□□ -1.08
CCDC7-216ENST00000640058 PCDHA11Q9Y5I1 949 aa8.29□□□□□ -1.08
CCDC7-216ENST00000640058 FAM86C2PA6NEL3 165 aa8.28□□□□□ -1.08
CCDC7-216ENST00000640058 ERVFC1P60507 584 aa8.28□□□□□ -1.08
CCDC7-216ENST00000640058 ZNF648Q5T619 568 aaPredicted RBP8.28□□□□□ -1.08
CCDC7-216ENST00000640058 REXO1Q8N1G1 1221 aaKnown RBP8.28□□□□□ -1.08
CCDC7-216ENST00000640058 LIN37Q96GY3 246 aaPredicted RBP8.28□□□□□ -1.08
CCDC7-216ENST00000640058 ADAMTS10Q9H324 1103 aa8.28□□□□□ -1.08
CCDC7-216ENST00000640058 CNNM2Q9H8M5 875 aa8.28□□□□□ -1.08
CCDC7-216ENST00000640058 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.28□□□□□ -1.08
CCDC7-216ENST00000640058 TMEM59LQ9UK28 342 aa8.28□□□□□ -1.08
CCDC7-216ENST00000640058 ZNF503-AS2A6NEH8 195 aa8.27□□□□□ -1.09
CCDC7-216ENST00000640058 RACK1P63244 317 aaKnown RBP8.27□□□□□ -1.09
CCDC7-216ENST00000640058 RNF4P78317 190 aa8.27□□□□□ -1.09
CCDC7-216ENST00000640058 CDCP2Q5VXM1 449 aa8.27□□□□□ -1.09
CCDC7-216ENST00000640058 TMEM40Q8WWA1 233 aa8.27□□□□□ -1.09
CCDC7-216ENST00000640058 VWCEQ96DN2 955 aa8.27□□□□□ -1.09
CCDC7-216ENST00000640058 NME1P15531 152 aaKnown RBP8.26□□□□□ -1.09
CCDC7-216ENST00000640058 NMIQ13287 307 aaPredicted RBP8.26□□□□□ -1.09
CCDC7-216ENST00000640058 SNW1Q13573 536 aaKnown RBP8.26□□□□□ -1.09
CCDC7-216ENST00000640058 MLANAQ16655 118 aa8.26□□□□□ -1.09
CCDC7-216ENST00000640058 LCE3BQ5TA77 95 aa8.26□□□□□ -1.09
CCDC7-216ENST00000640058 POU5F2Q8N7G0 328 aa8.26□□□□□ -1.09
CCDC7-216ENST00000640058 CCDC120Q96HB5 630 aa8.26□□□□□ -1.09
CCDC7-216ENST00000640058 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC7-216ENST00000640058 ASCC2Q9H1I8 757 aaPredicted RBP8.26□□□□□ -1.09
CCDC7-216ENST00000640058 LRRC10BA6NIK2 292 aa8.25□□□□□ -1.09
CCDC7-216ENST00000640058 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.25□□□□□ -1.09
CCDC7-216ENST00000640058 SCAMP3O14828 347 aaKnown RBP8.25□□□□□ -1.09
CCDC7-216ENST00000640058 CLEC3AO75596 197 aa8.25□□□□□ -1.09
CCDC7-216ENST00000640058 RAC2P15153 192 aa8.25□□□□□ -1.09
CCDC7-216ENST00000640058 TMEM67Q5HYA8 995 aa8.25□□□□□ -1.09
CCDC7-216ENST00000640058 NBPF12Q5TAG4 269 aaPredicted RBP8.25□□□□□ -1.09
CCDC7-216ENST00000640058 FBXW10Q5XX13 1052 aa8.25□□□□□ -1.09
CCDC7-216ENST00000640058 MPZL3Q6UWV2 235 aa8.25□□□□□ -1.09
CCDC7-216ENST00000640058 TMC3Q7Z5M5 1100 aa8.25□□□□□ -1.09
CCDC7-216ENST00000640058 MRRFQ96E11 262 aaKnown RBP8.25□□□□□ -1.09
CCDC7-216ENST00000640058 C8AP07357 584 aa8.24□□□□□ -1.09
CCDC7-216ENST00000640058 GLI1P08151 1106 aa8.24□□□□□ -1.09
CCDC7-216ENST00000640058 TRHRP34981 398 aaPredicted RBP8.24□□□□□ -1.09
CCDC7-216ENST00000640058 LRRFIP1Q32MZ4 808 aaKnown RBP8.24□□□□□ -1.09
CCDC7-216ENST00000640058 C9orf131Q5VYM1 1079 aa8.24□□□□□ -1.09
CCDC7-216ENST00000640058 KRTAP1-3Q8IUG1 177 aa8.24□□□□□ -1.09
CCDC7-216ENST00000640058 TMEM192Q8IY95 271 aa8.24□□□□□ -1.09
CCDC7-216ENST00000640058 ABHD4Q8TB40 342 aa8.24□□□□□ -1.09
CCDC7-216ENST00000640058 FERD3LQ96RJ6 166 aa8.24□□□□□ -1.09
CCDC7-216ENST00000640058 DDX41Q9UJV9 622 aaKnown RBP8.24□□□□□ -1.09
CCDC7-216ENST00000640058 MEIS3P2A8K0S8 358 aa8.23□□□□□ -1.09
CCDC7-216ENST00000640058 NBPF9Q3BBW0 867 aa8.23□□□□□ -1.09
CCDC7-216ENST00000640058 SLC6A18Q96N87 628 aa8.23□□□□□ -1.09
CCDC7-216ENST00000640058 SLC9A7Q96T83 725 aa8.23□□□□□ -1.09
CCDC7-216ENST00000640058 HDAC8Q9BY41 377 aa8.23□□□□□ -1.09
CCDC7-216ENST00000640058 MKRN2Q9H000 416 aaKnown RBP8.23□□□□□ -1.09
CCDC7-216ENST00000640058 PPT2Q9UMR5 302 aa8.23□□□□□ -1.09
CCDC7-216ENST00000640058 MINPP1Q9UNW1 487 aa8.23□□□□□ -1.09
CCDC7-216ENST00000640058 TNFRSF10CO14798 259 aa8.22□□□□□ -1.09
CCDC7-216ENST00000640058 FARP2O94887 1054 aaPredicted RBP8.22□□□□□ -1.09
CCDC7-216ENST00000640058 ZGLP1P0C6A0 271 aa8.22□□□□□ -1.09
CCDC7-216ENST00000640058 YBX3P16989 372 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC7-216ENST00000640058 VAMP1P23763 118 aa8.22□□□□□ -1.09
CCDC7-216ENST00000640058 TEKQ02763 1124 aa8.22□□□□□ -1.09
CCDC7-216ENST00000640058 ZNF124Q15973 351 aa8.22□□□□□ -1.09
CCDC7-216ENST00000640058 PRR23BQ6ZRT6 265 aa8.22□□□□□ -1.09
CCDC7-216ENST00000640058 MYLIPQ8WY64 445 aa8.22□□□□□ -1.09
CCDC7-216ENST00000640058 PRDM14Q9GZV8 571 aa8.22□□□□□ -1.09
CCDC7-216ENST00000640058 ZNRF3Q9ULT6 936 aa8.22□□□□□ -1.09
CCDC7-216ENST00000640058 UNCXA6NJT0 531 aa8.21□□□□□ -1.1
CCDC7-216ENST00000640058 HPXP02790 462 aa8.21□□□□□ -1.1
CCDC7-216ENST00000640058 RAD51AP2Q09MP3 1159 aa8.21□□□□□ -1.1
CCDC7-216ENST00000640058 PAK2Q13177 524 aa8.21□□□□□ -1.1
CCDC7-216ENST00000640058 METTL16Q86W50 562 aaKnown RBP8.21□□□□□ -1.1
CCDC7-216ENST00000640058 ZNF654Q8IZM8 581 aa8.21□□□□□ -1.1
CCDC7-216ENST00000640058 SYTL4Q96C24 671 aaPredicted RBP8.21□□□□□ -1.1
CCDC7-216ENST00000640058 FOXP3Q9BZS1 431 aa8.21□□□□□ -1.1
CCDC7-216ENST00000640058 C19orf44Q9H6X5 657 aa8.21□□□□□ -1.1
CCDC7-216ENST00000640058 MEIS1O00470 390 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms