RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 BRD3Q15059 726 aa11.41□□□□□ -0.58
HNRNPU-224ENST00000640056 SF3B3Q15393 1217 aaKnown RBP11.41□□□□□ -0.58
HNRNPU-224ENST00000640056 NT5DC1Q5TFE4 455 aa11.41□□□□□ -0.58
HNRNPU-224ENST00000640056 PNMA8AQ86V59 439 aaPredicted RBP11.41□□□□□ -0.58
HNRNPU-224ENST00000640056 MLKLQ8NB16 471 aa11.41□□□□□ -0.58
HNRNPU-224ENST00000640056 GRAPLQ8TC17 118 aaPredicted RBP11.41□□□□□ -0.58
HNRNPU-224ENST00000640056 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.41□□□□□ -0.581e-13■□□□□ 10.1
HNRNPU-224ENST00000640056 RTFDC1Q9BY42 306 aaPredicted RBP11.41□□□□□ -0.58
HNRNPU-224ENST00000640056 PUS3Q9BZE2 481 aaKnown RBP11.41□□□□□ -0.58
HNRNPU-224ENST00000640056 DACH1Q9UI36 760 aa11.41□□□□□ -0.58
HNRNPU-224ENST00000640056 GPAA1O43292 621 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 TRIM29Q14134 588 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 C3orf67Q6ZVT6 689 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 LDHDQ86WU2 507 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 CCDC191Q8NCU4 936 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 HNRNPLLQ8WVV9 542 aaKnown RBP11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 EXOC4Q96A65 974 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 DHX58Q96C10 678 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 XAGE2Q96GT9 111 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 CCDC34Q96HJ3 373 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 MAN1B1Q9UKM7 699 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 NFE2L3Q9Y4A8 694 aa11.4□□□□□ -0.58
HNRNPU-224ENST00000640056 SH2B2O14492 632 aaPredicted RBP11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 MAP2K7O14733 419 aa11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 SARSP49591 514 aaKnown RBP11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 TUBB4BP68371 445 aa11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 NR1I3Q14994 352 aa11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 ZSCAN26Q16670 478 aa11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 LONRF2Q1L5Z9 754 aa11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 LARGE2Q8N3Y3 721 aa11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 FEZ2Q9UHY8 353 aaPredicted RBP11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 HACL1Q9UJ83 578 aa11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 ADAM21Q9UKJ8 722 aa11.4□□□□□ -0.59
HNRNPU-224ENST00000640056 CCDC175P0C221 793 aa11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 HSPA8P11142 646 aaKnown RBP11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 ZAP70P43403 619 aa11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 FMR1Q06787 632 aaKnown RBP eCLIP11.39□□□□□ -0.591e-11■□□□□ 9.3
HNRNPU-224ENST00000640056 POSTNQ15063 836 aa11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 NTRK3Q16288 839 aa11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 APOA5Q6Q788 366 aa11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 TRIML1Q8N9V2 468 aa11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 ZBTB38Q8NAP3 1195 aaPredicted RBP11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 CCDC12Q8WUD4 166 aaPredicted RBP11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 PHKBQ93100 1093 aa11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 PANX2Q96RD6 677 aa11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 TAF1DQ9H5J8 278 aaPredicted RBP11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 WBP1LQ9NX94 342 aa11.39□□□□□ -0.59
HNRNPU-224ENST00000640056 DICER1Q9UPY3 1922 aaKnown RBP11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 ZNF541Q9H0D2 1346 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 ADORA1P30542 326 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 TUBB2AQ13885 445 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 MORC3Q14149 939 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 CCDC57Q2TAC2 916 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 HSP90AA4PQ58FG1 418 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 CYB5R4Q7L1T6 521 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 SRGAP1Q7Z6B7 1085 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 MSL3Q8N5Y2 521 aaKnown RBP11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 GOLGA5Q8TBA6 731 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 TMEM87BQ96K49 555 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 TRERF1Q96PN7 1200 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 TUBB2BQ9BVA1 445 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 NBPF3Q9H094 633 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 CWC15Q9P013 229 aaKnown RBP11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 RAI14Q9P0K7 980 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 AKR1B15C9JRZ8 316 aaPredicted RBP11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 ZBTB43O43298 467 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 ERCC5P28715 1186 aaPredicted RBP11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 CHMP4BP1P59074 171 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 SCARF1Q14162 830 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 HABP4Q5JVS0 413 aaKnown RBP11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 DPP8Q6V1X1 898 aaPredicted RBP11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 STK11IPQ8N1F8 1099 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 CEP112Q8N8E3 955 aa11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 NAA15Q9BXJ9 866 aaKnown RBP11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.38□□□□□ -0.592e-12■□□□□ 11
HNRNPU-224ENST00000640056 MRPL44Q9H9J2 332 aaKnown RBP11.38□□□□□ -0.59
HNRNPU-224ENST00000640056 ANKRD36CQ5JPF3 1778 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 A0A1B0GTH6 734 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 IRS4O14654 1257 aaPredicted RBP11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 TNRC18O15417 2968 aaPredicted RBP11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 PPIP5K2O43314 1243 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 PCCAP05165 728 aaPredicted RBP11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 RXRAP19793 462 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 PTPREP23469 700 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 USP5P45974 858 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 KARSQ15046 597 aaKnown RBP11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 CT47A1Q5JQC4 288 aaPredicted RBP11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 KANK3Q6NY19 840 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 SGMS1Q86VZ5 419 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 NOSTRINQ8IVI9 506 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 IGDCC4Q8TDY8 1250 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 FAM89AQ96GI7 184 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 DESI2Q9BSY9 194 aa11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
HNRNPU-224ENST00000640056 CDC23Q9UJX2 597 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms