RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 TUBB8Q3ZCM7 444 aa6.34□□□□□ -1.4
SCARB2-218ENST00000639715 ZNF569Q5MCW4 686 aa6.34□□□□□ -1.4
SCARB2-218ENST00000639715 KIAA0825Q8IV33 1275 aa6.34□□□□□ -1.4
SCARB2-218ENST00000639715 WHAMMQ8TF30 809 aa6.34□□□□□ -1.4
SCARB2-218ENST00000639715 CRNKL1Q9BZJ0 848 aaKnown RBP6.34□□□□□ -1.4
SCARB2-218ENST00000639715 RCOR1Q9UKL0 485 aa6.34□□□□□ -1.4
SCARB2-218ENST00000639715 SH3TC1Q8TE82 1336 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 CTAGE9A4FU28 777 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 HSF2BPO75031 334 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 NR1I2O75469 434 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 USP5P45974 858 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 PPFIA1Q13136 1202 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 PUM3Q15397 648 aaKnown RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 PPP1R7Q15435 360 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 ZC3H12AQ5D1E8 599 aaKnown RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 FKBP15Q5T1M5 1219 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 MYSM1Q5VVJ2 828 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 DZIP3Q86Y13 1208 aaKnown RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 NUTM2AQ8IVF1 878 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 FAM89AQ96GI7 184 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 RAB34Q9BZG1 259 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 ERBB3P21860 1342 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 BCL9LQ86UU0 1499 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 PDE8AO60658 829 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 CYP21A2P08686 494 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 ITGA6P23229 1130 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 CALML3P27482 149 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 CA8P35219 290 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 HSPA2P54652 639 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 AMPD3Q01432 767 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 THEMIS2Q5TEJ8 643 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 LMNTD2Q8IXW0 634 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 ZNF444Q8N0Y2 327 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 C3orf20Q8ND61 904 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 TRIM58Q8NG06 486 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 ZNF483Q8TF39 744 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 USP28Q96RU2 1077 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 KIAA1468Q9P260 1216 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 N4BP3O15049 544 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 C21orf2O43822 256 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 RAD21O60216 631 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 DEXIO95424 95 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 UBA7P41226 1012 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 PTPN12Q05209 780 aaKnown RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 TSGA10IPQ3SY00 556 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 PREPLQ4J6C6 727 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 IFIT1BQ5T764 474 aaKnown RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 TRIM68Q6AZZ1 485 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 TRIM42Q8IWZ5 723 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 PARP9Q8IXQ6 854 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 MLKLQ8NB16 471 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 ZNF594Q96JF6 807 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 NUP88Q99567 741 aaPredicted RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 PPP1R12CQ9BZL4 782 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 XPO4Q9C0E2 1151 aaKnown RBP6.33□□□□□ -1.4
SCARB2-218ENST00000639715 TCP11L1Q9NUJ3 509 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 RTEL1Q9NZ71 1219 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 KCNH3Q9ULD8 1083 aa6.33□□□□□ -1.4
SCARB2-218ENST00000639715 PCCAP05165 728 aaPredicted RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 CLTAP09496 248 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 CCDC175P0C221 793 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 CMA1P23946 247 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 ATP1A2P50993 1020 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 CUL3Q13618 768 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 SPA17Q15506 151 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 PARP10Q53GL7 1025 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 CEP128Q6ZU80 1094 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 SRGAP1Q7Z6B7 1085 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 MAGEB6Q8N7X4 407 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 CPLX3Q8WVH0 158 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 LPIN2Q92539 896 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 KAT2BQ92831 832 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 SEC62Q99442 399 aaKnown RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 SEC63Q9UGP8 760 aaKnown RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 MAGEB6P1A0A0J9YX57 407 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 TSPY2A6NKD2 308 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 EIF4E1BA6NMX2 242 aaKnown RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 ZPR1O75312 459 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 LARGE1O95461 756 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 PDIA3P30101 505 aaKnown RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 FANCCQ00597 558 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 PPARDQ03181 441 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 IFFO1Q0D2I5 559 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 KRT40Q6A162 431 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 SLF2Q8IX21 1173 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 IGSF22Q8N9C0 903 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 EHBP1Q8NDI1 1231 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 LMBR1Q8WVP7 490 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 BICD1Q96G01 975 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 FAXDC2Q96IV6 333 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 KAT14Q9H8E8 782 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 TLR7Q9NYK1 1049 aaKnown RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 MCM8Q9UJA3 840 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 NDUFB9Q9Y6M9 179 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 ADAMTS13Q76LX8 1427 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 MEFVO15553 781 aaPredicted RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 BAG3O95817 575 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 KRT18P05783 430 aaKnown RBP6.32□□□□□ -1.4
SCARB2-218ENST00000639715 DESP17661 470 aa6.32□□□□□ -1.4
SCARB2-218ENST00000639715 ZAP70P43403 619 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms