RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 CTC1Q2NKJ3 1217 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 ZNF528Q3MIS6 628 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 CRIPAKQ8N1N5 446 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 ANKRD13CQ8N6S4 541 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 DTWD2Q8NBA8 298 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 NUP133Q8WUM0 1156 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 UBL7Q96S82 380 aaPredicted RBP4.68□□□□□ -1.66
CCDC7-213ENST00000639290 ZSWIM6Q9HCJ5 1215 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 POLKQ9UBT6 870 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 ZNF70Q9UC06 446 aaPredicted RBP4.68□□□□□ -1.66
CCDC7-213ENST00000639290 SERPINA10Q9UK55 444 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 DCDC2BA2VCK2 349 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 FAM221BA6H8Z2 402 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 STK25O00506 426 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 HOXB1P14653 301 aaPredicted RBP4.68□□□□□ -1.66
CCDC7-213ENST00000639290 CSF2RAP15509 400 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 TEFQ10587 303 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 SERINC3Q13530 473 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 GJC2Q5T442 439 aaPredicted RBP4.68□□□□□ -1.66
CCDC7-213ENST00000639290 RNF180Q86T96 592 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 NCDNQ9UBB6 729 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 CDK5RAP2Q96SN8 1893 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 USP9XQ93008 2570 aaPredicted RBP4.67□□□□□ -1.66
CCDC7-213ENST00000639290 BAIAP3O94812 1187 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 VARS2Q5ST30 1063 aaKnown RBP4.67□□□□□ -1.66
CCDC7-213ENST00000639290 TTLL5Q6EMB2 1281 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 ZCCHC14Q8WYQ9 949 aaKnown RBP4.67□□□□□ -1.66
CCDC7-213ENST00000639290 HS3ST6Q96QI5 342 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 TGS1Q96RS0 853 aaKnown RBP4.67□□□□□ -1.66
CCDC7-213ENST00000639290 LMAN2LQ9H0V9 348 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 NSUN3Q9H649 340 aaKnown RBP4.67□□□□□ -1.66
CCDC7-213ENST00000639290 ANKIB1Q9P2G1 1089 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 FSD2A1L4K1 749 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 SLC15A5A6NIM6 579 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 TBC1D4O60343 1298 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 AOC1P19801 751 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 CDK7P50613 346 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 RABGGTBP53611 331 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 KRT40Q6A162 431 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 KIAA0825Q8IV33 1275 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 CELF1Q92879 486 aaKnown RBP4.67□□□□□ -1.66
CCDC7-213ENST00000639290 RYDENQ9NUL5 291 aaKnown RBP4.67□□□□□ -1.66
CCDC7-213ENST00000639290 KCNK4Q9NYG8 393 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 CD207Q9UJ71 328 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 USP16Q9Y5T5 823 aa4.67□□□□□ -1.66
CCDC7-213ENST00000639290 ROCK2O75116 1388 aaKnown RBP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 A0A1W2PQ45 241 aaPredicted RBP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 A0A1W2PQY0 241 aa4.66□□□□□ -1.66
CCDC7-213ENST00000639290 PQBP1O60828 265 aaKnown RBP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 KINO60870 393 aaKnown RBP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 ZNF76P36508 570 aa4.66□□□□□ -1.66
CCDC7-213ENST00000639290 EIF4G2P78344 907 aaKnown RBP eCLIP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 RRP1BQ14684 758 aaKnown RBP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 N4BP2L1Q5TBK1 243 aaPredicted RBP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 PLEKHH3Q7Z736 793 aa4.66□□□□□ -1.66
CCDC7-213ENST00000639290 GATA6Q92908 595 aa4.66□□□□□ -1.66
CCDC7-213ENST00000639290 MROH7-TTC4A0A0A0MT08 1334 aa4.66□□□□□ -1.66
CCDC7-213ENST00000639290 MAPK8IP3Q9UPT6 1336 aa4.66□□□□□ -1.66
CCDC7-213ENST00000639290 HDLBPQ00341 1268 aaKnown RBP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 HERC6Q8IVU3 1022 aa4.66□□□□□ -1.66
CCDC7-213ENST00000639290 PRMT6Q96LA8 375 aaPredicted RBP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 PHF7Q9BWX1 381 aaPredicted RBP4.66□□□□□ -1.66
CCDC7-213ENST00000639290 LEMD3Q9Y2U8 911 aa4.66□□□□□ -1.66
CCDC7-213ENST00000639290 GPSM3Q9Y4H4 160 aa4.66□□□□□ -1.66
CCDC7-213ENST00000639290 CDH23Q9H251 3354 aa4.65□□□□□ -1.66
CCDC7-213ENST00000639290 C1QTNF9BB2RNN3 333 aa4.65□□□□□ -1.66
CCDC7-213ENST00000639290 C1QTNF9P0C862 333 aa4.65□□□□□ -1.66
CCDC7-213ENST00000639290 COASYQ13057 564 aa4.65□□□□□ -1.66
CCDC7-213ENST00000639290 C15orf52Q6ZUT6 534 aaKnown RBP4.65□□□□□ -1.66
CCDC7-213ENST00000639290 ZNF605Q86T29 641 aa4.65□□□□□ -1.66
CCDC7-213ENST00000639290 RPAINQ86UA6 219 aa4.65□□□□□ -1.66
CCDC7-213ENST00000639290 EDC3Q96F86 508 aaKnown RBP4.65□□□□□ -1.66
CCDC7-213ENST00000639290 AFG3L2Q9Y4W6 797 aa4.65□□□□□ -1.66
CCDC7-213ENST00000639290 DOCK1Q14185 1865 aa4.65□□□□□ -1.67
CCDC7-213ENST00000639290 H3BQ06 376 aaPredicted RBP4.65□□□□□ -1.67
CCDC7-213ENST00000639290 MYOGP15173 224 aa4.65□□□□□ -1.67
CCDC7-213ENST00000639290 GPTP24298 496 aa4.65□□□□□ -1.67
CCDC7-213ENST00000639290 MTMR3Q13615 1198 aa4.65□□□□□ -1.67
CCDC7-213ENST00000639290 ZNF513Q8N8E2 541 aaPredicted RBP4.65□□□□□ -1.67
CCDC7-213ENST00000639290 GPRC5AQ8NFJ5 357 aa4.65□□□□□ -1.67
CCDC7-213ENST00000639290 FAM84BQ96KN1 310 aaPredicted RBP4.65□□□□□ -1.67
CCDC7-213ENST00000639290 LSM14BQ9BX40 385 aaKnown RBP4.65□□□□□ -1.67
CCDC7-213ENST00000639290 ADAM33Q9BZ11 813 aa4.65□□□□□ -1.67
CCDC7-213ENST00000639290 SLC24A3Q9HC58 644 aa4.65□□□□□ -1.67
CCDC7-213ENST00000639290 ACRP10323 421 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 CST5P28325 142 aaPredicted RBP4.64□□□□□ -1.67
CCDC7-213ENST00000639290 ATP2B2Q01814 1243 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 SCYL3Q8IZE3 742 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 CRACR2BQ8N4Y2 399 aaPredicted RBP4.64□□□□□ -1.67
CCDC7-213ENST00000639290 BANK1Q8NDB2 785 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 FBXO22Q8NEZ5 403 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 KCNV2Q8TDN2 545 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 JARID2Q92833 1246 aaPredicted RBP4.64□□□□□ -1.67
CCDC7-213ENST00000639290 MRIQ9BWK5 157 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 STARD7Q9NQZ5 370 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 SORCS3Q9UPU3 1222 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 CHD9Q3L8U1 2897 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 MYO9BQ13459 2157 aa4.64□□□□□ -1.67
CCDC7-213ENST00000639290 A0A0U1RQG5 324 aaPredicted RBP4.64□□□□□ -1.67
CCDC7-213ENST00000639290 APBB1O00213 710 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms