RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 SIM2Q14190 667 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 GRAMD1BQ3KR37 738 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 ALFQ53S48 1182 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 TWF2Q6IBS0 349 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 MRPS23Q9Y3D9 190 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 TTLL3Q9Y4R7 772 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 A0A0B4J203 849 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 MACROD2A1Z1Q3 448 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 C19orf81C9J6K1 198 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 POTEIP0CG38 1075 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 Q3C1V9 767 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 ADALQ6DHV7 355 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 FIP1L1Q6UN15 594 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 SLC7A5P1Q8MH63 180 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 ANKRD42Q8N9B4 389 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 TUBA1CQ9BQE3 449 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 VCX3AQ9NNX9 186 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 BZW2Q9Y6E2 419 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 RANBP6O60518 1105 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 GBP1P32455 592 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 CCDC62Q6P9F0 684 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 LINC00469Q8N7U9 141 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 GDAP1Q8TB36 358 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 HOOK2Q96ED9 719 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 MOGAT1Q96PD6 335 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 ATP6V0A4Q9HBG4 840 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 DNAAF2Q9NVR5 837 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 PPP2R3BQ9Y5P8 575 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 CHD4Q14839 1912 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 RPAP1Q9BWH6 1393 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 LDHBP07195 334 aaKnown RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 SCRN1Q12765 414 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 CFAP161Q6P656 301 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 PPP2R3CQ969Q6 453 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 NLRP3Q96P20 1036 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 DBNDD1Q9H9R9 158 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 SUCLA2Q9P2R7 463 aaPredicted RBP4.78□□□□□ -1.64
SCN3A-209ENST00000639244 SLC30A1Q9Y6M5 507 aa4.78□□□□□ -1.64
SCN3A-209ENST00000639244 BPNT1O95861 308 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PSMA4P25789 261 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PRKAR1BP31321 381 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 SNX1Q13596 522 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 C15orf59Q2T9L4 293 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 NRBF2Q96F24 287 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 CYP4F11Q9HBI6 524 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 TUBGCP4Q9UGJ1 667 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 STRIP2Q9ULQ0 834 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 E9PMD0 336 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 HSD17B7P56937 341 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 MRPS15P82914 257 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 CCBE1Q6UXH8 406 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 BRAPQ7Z569 592 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 TBC1D20Q96BZ9 403 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 CDCA5Q96FF9 252 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 SERHL2Q9H4I8 314 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 SCAF8Q9UPN6 1271 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 CECR2Q9BXF3 1484 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 SYNJ2BP-COX16A0A087WUM0 186 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 MYZAPP0CAP1 466 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 BCRP11274 1271 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 SEMA3AQ14563 771 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 DZIP1LQ8IYY4 767 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 OR8H2Q8N162 312 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 CERKQ8TCT0 537 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 SH3KBP1Q96B97 665 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 TNIP3Q96KP6 325 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 ZSCAN16Q9H4T2 348 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 DDX25Q9UHL0 483 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 BIRC5O15392 142 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 GUCY1B2O75343 617 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 DNAJA1P31689 397 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PDE1BQ01064 536 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 ANO1Q5XXA6 986 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PPP4R3AQ6IN85 833 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 OPTNQ96CV9 577 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 COQ7Q99807 217 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 GBP3Q9H0R5 595 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 ERICH2A1L162 156 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 SPDYE3A6NKU9 549 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PI4K2BG5E9Z4 385 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 MOGSQ13724 837 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 KCNB1Q14721 858 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 KSR2Q6VAB6 950 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PI4K2BQ8TCG2 481 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 CASP10Q92851 521 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 TSR2Q969E8 191 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 APBA2Q99767 749 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 EHMT1Q9H9B1 1298 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 APOL1O14791 398 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 HOXC13P31276 330 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 CWF19L1Q69YN2 538 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 PDXDC1Q6P996 788 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 ST13P4Q8IZP2 240 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 GIMAP8Q8ND71 665 aaPredicted RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 CCHCR1Q8TD31 782 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 NOC3LQ8WTT2 800 aaKnown RBP4.77□□□□□ -1.65
SCN3A-209ENST00000639244 LMBR1Q8WVP7 490 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 DHX58Q96C10 678 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 VPS37BQ9H9H4 285 aa4.77□□□□□ -1.65
SCN3A-209ENST00000639244 IL1RAPL1Q9NZN1 696 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms