RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 B4GALNT2Q8NHY0 566 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 CPLX3Q8WVH0 158 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 SPG7Q9UQ90 795 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 TTC21BQ7Z4L5 1316 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 A6NNZ2 444 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 TPD52L2O43399 206 aaKnown RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 CUTAO60888 179 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 ZNF202O95125 648 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 TUBB8Q3ZCM7 444 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 PRPF40BQ6NWY9 871 aaKnown RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 CEP85Q6P2H3 762 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 MYLK4Q86YV6 388 aaPredicted RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 ZNF396Q96N95 335 aaPredicted RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 BEGAINQ9BUH8 593 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 SIL1Q9H173 461 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 MYH13Q9UKX3 1938 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 PPFIA2O75334 1257 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 PDHBP11177 359 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 ACRBPQ8NEB7 543 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 UPF1Q92900 1129 aaKnown RBP eCLIP8□□□□□ -1.134e-7■■■□□ 15.7
NECAP1-213ENST00000638883 PNKPQ96T60 521 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 ZNF330Q9Y3S2 320 aaPredicted RBP8□□□□□ -1.13
NECAP1-213ENST00000638883 MAP3K19Q56UN5 1328 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 TNS3Q68CZ2 1445 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 PYGLP06737 847 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 TPP2P29144 1249 aaPredicted RBP8□□□□□ -1.13
NECAP1-213ENST00000638883 GGCXP38435 758 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 KCNJ6P48051 423 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 GRIK3Q13003 919 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 PTPN21Q16825 1174 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 RCSD1Q6JBY9 416 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 OSBPL9Q96SU4 736 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 TMEM165Q9HC07 324 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 SLC40A1Q9NP59 571 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 HSF2BPO75031 334 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 RAB11FIP3O75154 756 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 SMTNP53814 917 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 SLC8A3P57103 927 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 PDCLQ13371 301 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 MTHFSDQ2M296 383 aaKnown RBP8□□□□□ -1.13
NECAP1-213ENST00000638883 TRIM65Q6PJ69 517 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 TATDN2Q93075 761 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 STRN4Q9NRL3 753 aa8□□□□□ -1.13
NECAP1-213ENST00000638883 DDX20Q9UHI6 824 aaKnown RBP8□□□□□ -1.13
NECAP1-213ENST00000638883 EIF3HO15372 352 aaKnown RBP eCLIP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 PSMA5P28066 241 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 MXRA7P84157 204 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 MDM2Q00987 491 aaPredicted RBP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 PPARDQ03181 441 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 STK38Q15208 465 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 ODF2Q5BJF6 829 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 LARP1Q6PKG0 1096 aaKnown RBP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 CCDC47Q96A33 483 aaKnown RBP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 TEX13AQ9BXU3 409 aaPredicted RBP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 EHD4Q9H223 541 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 SNX14Q9Y5W7 946 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 RPS6KL1Q9Y6S9 549 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 LRRIQ3A6PVS8 624 aaPredicted RBP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 LILRB3O75022 631 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 HOXB3P14651 431 aaPredicted RBP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 FAM160A1Q05DH4 1040 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 PPP1R7Q15435 360 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 NUTM2GQ5VZR2 741 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 FCHSD1Q86WN1 690 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 TRIM58Q8NG06 486 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 SPIRE2Q8WWL2 714 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 KCND1Q9NSA2 647 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 TPX2Q9ULW0 747 aaKnown RBP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 EIF4E1BA6NMX2 242 aaKnown RBP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 E7EVH7 732 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 CD46P15529 392 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 IFFO1Q0D2I5 559 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 USP4Q13107 963 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 MTX1Q13505 466 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 TUBB2AQ13885 445 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 ZRSR2Q15696 482 aaKnown RBP7.99□□□□□ -1.13
NECAP1-213ENST00000638883 WHAMMP3Q1A5X7 153 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 ARMC9Q7Z3E5 817 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 CNTROBQ8N137 903 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 MIPOL1Q8TD10 442 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 NSMCE1Q8WV22 266 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 TCEANC2Q96MN5 208 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 TUBB2BQ9BVA1 445 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 ATP6V0A4Q9HBG4 840 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 IL1RAPL2Q9NP60 686 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 HOMER3Q9NSC5 361 aa7.99□□□□□ -1.13
NECAP1-213ENST00000638883 CLTAP09496 248 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 ADKP55263 362 aaKnown RBP7.98□□□□□ -1.13
NECAP1-213ENST00000638883 BLOC1S2Q6QNY1 142 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 TCP11Q8WWU5 503 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 FSBPO95073 299 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 IFIT2P09913 472 aaKnown RBP7.98□□□□□ -1.13
NECAP1-213ENST00000638883 MTA1Q13330 715 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 CYB5D1Q6P9G0 228 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 PADI6Q6TGC4 694 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 FAM114A1Q8IWE2 563 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 DHX40Q8IX18 779 aaKnown RBP7.98□□□□□ -1.13
NECAP1-213ENST00000638883 CCDC13Q8IYE1 715 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 HINFPQ9BQA5 517 aa7.98□□□□□ -1.13
NECAP1-213ENST00000638883 IRX2Q9BZI1 471 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms