RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 DACH2Q96NX9 599 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 DBF4Q9UBU7 674 aaPredicted RBP14.4□□□□□ -0.1
UBE3A-228ENST00000638155 FAM95CA0A1B0GW59 222 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 ITKQ08881 620 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 ACBD5Q5T8D3 534 aaPredicted RBP14.4□□□□□ -0.1
UBE3A-228ENST00000638155 GPC4O75487 556 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 PAK1Q13153 545 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 LDHAL6AQ6ZMR3 332 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 ZNF804AQ7Z570 1209 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 SERPINI1Q99574 410 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 NPHP3Q7Z494 1330 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 CYP7A1P22680 504 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 RAB20Q9NX57 234 aa14.4□□□□□ -0.1
UBE3A-228ENST00000638155 TTI1O43156 1089 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 KDM1AO60341 852 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 MRPS15P82914 257 aaKnown RBP14.39□□□□□ -0.11
UBE3A-228ENST00000638155 VPS16Q9H269 839 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 GLE1Q53GS7 698 aaKnown RBP14.39□□□□□ -0.11
UBE3A-228ENST00000638155 SSH1Q8WYL5 1049 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 ZFYVE1Q9HBF4 777 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 SAR1BQ9Y6B6 198 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 PLCG2P16885 1265 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 NME8Q8N427 588 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 SNRKQ9NRH2 765 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 KRIT1O00522 736 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 IFNB1P01574 187 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 PICALMQ13492 652 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 TMEM259Q4ZIN3 620 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 ATG16L1Q676U5 607 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 CSGALNACT2Q8N6G5 542 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 PNMA2Q9UL42 364 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 ANKRD50Q9ULJ7 1429 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 EEF1GP26641 437 aaKnown RBP14.39□□□□□ -0.11
UBE3A-228ENST00000638155 CARSP49589 748 aaKnown RBP14.39□□□□□ -0.11
UBE3A-228ENST00000638155 BLVRAP53004 296 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 TEX9Q8N6V9 391 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 TAF11Q15544 211 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 RAPH1Q70E73 1250 aa14.39□□□□□ -0.11
UBE3A-228ENST00000638155 RINT1Q6NUQ1 792 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 SPDYE1Q8NFV5 336 aaPredicted RBP14.38□□□□□ -0.11
UBE3A-228ENST00000638155 GSDMAQ96QA5 445 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 CSRNP1Q96S65 589 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 CCDC141Q6ZP82 1450 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 EXOC5O00471 708 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 ART3Q13508 389 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 NFKBIL1Q9UBC1 381 aaPredicted RBP14.38□□□□□ -0.11
UBE3A-228ENST00000638155 PIK3R4Q99570 1358 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 FGD6Q6ZV73 1430 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 PRPF6O94906 941 aaKnown RBP14.38□□□□□ -0.11
UBE3A-228ENST00000638155 PRPSAP1Q14558 356 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 BCAS4Q8TDM0 211 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 GDAP1L1Q96MZ0 367 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 TRIM58Q8NG06 486 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 IRAK4Q9NWZ3 460 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 PDE4DQ08499 809 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 ZC3H12BQ5HYM0 836 aaKnown RBP14.38□□□□□ -0.11
UBE3A-228ENST00000638155 PARP1P09874 1014 aaKnown RBP14.38□□□□□ -0.11
UBE3A-228ENST00000638155 SLC12A1Q13621 1099 aa14.38□□□□□ -0.11
UBE3A-228ENST00000638155 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 NOP56O00567 594 aaKnown RBP14.37□□□□□ -0.11
UBE3A-228ENST00000638155 JPH2Q9BR39 696 aaPredicted RBP14.37□□□□□ -0.11
UBE3A-228ENST00000638155 SPZ1Q9BXG8 430 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 TMEM247A6NEH6 219 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 SRGAP2BP0DMP2 458 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 DAPK1P53355 1430 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 UPF3AQ9H1J1 476 aaKnown RBP14.37□□□□□ -0.11
UBE3A-228ENST00000638155 MAGEB6P1A0A0J9YX57 407 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 PRR23D1E9PI22 279 aaPredicted RBP14.37□□□□□ -0.11
UBE3A-228ENST00000638155 PRR23D2P0DMB1 279 aaPredicted RBP14.37□□□□□ -0.11
UBE3A-228ENST00000638155 ATF2P15336 505 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 RARSP54136 660 aaKnown RBP14.37□□□□□ -0.11
UBE3A-228ENST00000638155 CCDC85BQ15834 202 aaPredicted RBP14.37□□□□□ -0.11
UBE3A-228ENST00000638155 FAM133BQ5BKY9 247 aaKnown RBP14.37□□□□□ -0.11
UBE3A-228ENST00000638155 TSHZ3Q63HK5 1081 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 HYOU1Q9Y4L1 999 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 LONRF3Q496Y0 759 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 PARD3BQ8TEW8 1205 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 COG4Q9H9E3 785 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 KIF17Q9P2E2 1029 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 CCPG1Q9ULG6 757 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 NBNO60934 754 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 KLHL30Q0D2K2 578 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 IFT88Q13099 833 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 SMC5Q8IY18 1101 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 TRIML2Q8N7C3 387 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 RUNDC3BQ96NL0 473 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 MYO1AQ9UBC5 1043 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 ATF7P17544 494 aaPredicted RBP14.37□□□□□ -0.11
UBE3A-228ENST00000638155 DDIT3P35638 169 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 PHKBQ93100 1093 aa14.37□□□□□ -0.11
UBE3A-228ENST00000638155 FBXW4P57775 412 aa14.36□□□□□ -0.11
UBE3A-228ENST00000638155 MYO10Q9HD67 2058 aa14.36□□□□□ -0.11
UBE3A-228ENST00000638155 INHBAP08476 426 aa14.36□□□□□ -0.11
UBE3A-228ENST00000638155 GRIN1Q05586 938 aa14.36□□□□□ -0.11
UBE3A-228ENST00000638155 TUBB6Q9BUF5 446 aa14.36□□□□□ -0.11
UBE3A-228ENST00000638155 HDAC4P56524 1084 aa14.36□□□□□ -0.11
UBE3A-228ENST00000638155 BBOF1Q8ND07 529 aa14.36□□□□□ -0.11
UBE3A-228ENST00000638155 GIPC2Q8TF65 315 aa14.36□□□□□ -0.11
UBE3A-228ENST00000638155 TSC1Q92574 1164 aa14.36□□□□□ -0.11
UBE3A-228ENST00000638155 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms