RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-249ENST00000637777 RRP12Q5JTH9 1297 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-249ENST00000637777 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
CACNA1A-249ENST00000637777 NBPF11Q86T75 865 aa17.11■□□□□ 0.33
CACNA1A-249ENST00000637777 BIN2Q9UBW5 565 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-249ENST00000637777 SRRDQ9UH36 339 aa17.11■□□□□ 0.33
CACNA1A-249ENST00000637777 TSPY2A6NKD2 308 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 GSPT1P15170 499 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 CTGFP29279 349 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 PRMT2P55345 433 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 HAND2P61296 217 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 PRKCZQ05513 592 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 FAM47AQ5JRC9 791 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 CATSPERGQ6ZRH7 1159 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 GPRC5AQ8NFJ5 357 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 LPAR1Q92633 364 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 VCPKMTQ9H867 229 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 TMX2Q9Y320 296 aa17.1■□□□□ 0.33
CACNA1A-249ENST00000637777 FLOT1O75955 427 aa17.09■□□□□ 0.33
CACNA1A-249ENST00000637777 FGAP02671 866 aa17.09■□□□□ 0.33
CACNA1A-249ENST00000637777 TFAP4Q01664 338 aa17.09■□□□□ 0.33
CACNA1A-249ENST00000637777 RUFY2Q8WXA3 655 aa17.09■□□□□ 0.33
CACNA1A-249ENST00000637777 CLIP2Q9UDT6 1046 aa17.09■□□□□ 0.33
CACNA1A-249ENST00000637777 WDR46O15213 610 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-249ENST00000637777 FOXP2O15409 715 aa17.08■□□□□ 0.32
CACNA1A-249ENST00000637777 PEX10O60683 326 aa17.08■□□□□ 0.32
CACNA1A-249ENST00000637777 ERVK-9P63128 1117 aa17.08■□□□□ 0.32
CACNA1A-249ENST00000637777 ERVK-24P63145 666 aa17.08■□□□□ 0.32
CACNA1A-249ENST00000637777 ALX1Q15699 326 aa17.08■□□□□ 0.32
CACNA1A-249ENST00000637777 SH3TC2Q8TF17 1288 aa17.08■□□□□ 0.32
CACNA1A-249ENST00000637777 CEP95Q96GE4 821 aa17.08■□□□□ 0.32
CACNA1A-249ENST00000637777 GREB1LQ9C091 1923 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-249ENST00000637777 TTLL1O95922 423 aa17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 CCNA1P78396 465 aa17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 PLS1Q14651 629 aa17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 LRRC47Q8N1G4 583 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 TMEM106CQ9BVX2 250 aa17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 TXNRD2Q9NNW7 524 aa17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 INCENPQ9NQS7 918 aa17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 HOXC10Q9NYD6 342 aa17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 MORF4L1Q9UBU8 362 aa17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 DOCK3Q8IZD9 2030 aa17.07■□□□□ 0.32
CACNA1A-249ENST00000637777 ZNF213O14771 459 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 GRK4P32298 578 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 FLT3LGP49771 235 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 COG2Q14746 738 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 KIAA1755Q5JYT7 1200 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 PPP4R3BQ5MIZ7 849 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 FAM83BQ5T0W9 1011 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 MFSD6Q6ZSS7 791 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 SIAH1Q8IUQ4 282 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 NEDD1Q8NHV4 660 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 CHMP4CQ96CF2 233 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 GABRQQ9UN88 632 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 STX8Q9UNK0 236 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 MTMR7Q9Y216 660 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 RABGAP1Q9Y3P9 1069 aa17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 CTDP1Q9Y5B0 961 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-249ENST00000637777 ZMYM6O95789 1325 aa17.05■□□□□ 0.32
CACNA1A-249ENST00000637777 SPDYE16A6NNV3 312 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-249ENST00000637777 MAPK4P31152 587 aa17.05■□□□□ 0.32
CACNA1A-249ENST00000637777 RNF41Q9H4P4 317 aaPredicted RBP17.05■□□□□ 0.32
CACNA1A-249ENST00000637777 MTMR4Q9NYA4 1195 aa17.05■□□□□ 0.32
CACNA1A-249ENST00000637777 RBPJLQ9UBG7 517 aa17.05■□□□□ 0.32
CACNA1A-249ENST00000637777 ANAPC4Q9UJX5 808 aa17.05■□□□□ 0.32
CACNA1A-249ENST00000637777 PLIN4Q96Q06 1357 aa17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 RAD50Q92878 1312 aa17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 ADCY3O60266 1144 aa17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 UBXN2AP68543 259 aa17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 IKQ13123 557 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 IMMTQ16891 758 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 SLAIN1Q8ND83 568 aa17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 NUP88Q99567 741 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 IVNS1ABPQ9Y6Y0 642 aa17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 LAMA4Q16363 1823 aa17.04■□□□□ 0.32
CACNA1A-249ENST00000637777 F5H6K3 240 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 NDUFB10O96000 172 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 ELNP15502 786 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 KLRC3Q07444 240 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 Q3C1V9 767 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 AKNAD1Q5T1N1 836 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 SKAP1Q86WV1 359 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 ARMC5Q96C12 935 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 ATG4CQ96DT6 458 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 ZNF333Q96JL9 665 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 NUDT12Q9BQG2 462 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 DSCC1Q9BVC3 393 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 PORCNQ9H237 461 aa17.03■□□□□ 0.32
CACNA1A-249ENST00000637777 CENPFP49454 3210 aa17.02■□□□□ 0.32
CACNA1A-249ENST00000637777 HTTP42858 3142 aa17.02■□□□□ 0.32
CACNA1A-249ENST00000637777 IGKV6D-41A0A0C4DH26 115 aa17.02■□□□□ 0.32
CACNA1A-249ENST00000637777 ORC4O43929 436 aa17.02■□□□□ 0.32
CACNA1A-249ENST00000637777 NMT2O60551 498 aa17.02■□□□□ 0.32
CACNA1A-249ENST00000637777 CYP2B6P20813 491 aa17.02■□□□□ 0.32
CACNA1A-249ENST00000637777 CHMLP26374 656 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms