RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 GTF2E1P29083 439 aaPredicted RBP15.33■□□□□ 0.05
CACNA1A-244ENST00000637625 ST13P50502 369 aaKnown RBP15.33■□□□□ 0.05
CACNA1A-244ENST00000637625 EAF2Q96CJ1 260 aaPredicted RBP15.33■□□□□ 0.05
CACNA1A-244ENST00000637625 AOX1Q06278 1338 aa15.33■□□□□ 0.04
CACNA1A-244ENST00000637625 GIPC1O14908 333 aa15.33■□□□□ 0.04
CACNA1A-244ENST00000637625 PHACTR2O75167 634 aa15.33■□□□□ 0.04
CACNA1A-244ENST00000637625 CAMTA2O94983 1202 aa15.33■□□□□ 0.04
CACNA1A-244ENST00000637625 TFCP2Q12800 502 aa15.33■□□□□ 0.04
CACNA1A-244ENST00000637625 ZBTB38Q8NAP3 1195 aaPredicted RBP15.33■□□□□ 0.04
CACNA1A-244ENST00000637625 TRMT112Q9UI30 125 aaKnown RBP15.33■□□□□ 0.04
CACNA1A-244ENST00000637625 TAF1LQ8IZX4 1826 aa15.33■□□□□ 0.04
CACNA1A-244ENST00000637625 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
CACNA1A-244ENST00000637625 TRIM28Q13263 835 aaKnown RBP15.32■□□□□ 0.04
CACNA1A-244ENST00000637625 CASC1Q6TDU7 716 aa15.32■□□□□ 0.04
CACNA1A-244ENST00000637625 C1orf127Q8N9H9 656 aa15.32■□□□□ 0.04
CACNA1A-244ENST00000637625 CCNL1Q9UK58 526 aaPredicted RBP15.32■□□□□ 0.04
CACNA1A-244ENST00000637625 SPATA31C2B4DYI2 1134 aa15.31■□□□□ 0.04
CACNA1A-244ENST00000637625 SCN7AQ01118 1682 aa15.31■□□□□ 0.04
CACNA1A-244ENST00000637625 HIF1AQ16665 826 aa15.31■□□□□ 0.04
CACNA1A-244ENST00000637625 LRRC24Q50LG9 513 aa15.31■□□□□ 0.04
CACNA1A-244ENST00000637625 LRRC69Q6ZNQ3 347 aa15.31■□□□□ 0.04
CACNA1A-244ENST00000637625 ZNF598Q86UK7 904 aaKnown RBP15.31■□□□□ 0.04
CACNA1A-244ENST00000637625 ZIC5Q96T25 663 aa15.31■□□□□ 0.04
CACNA1A-244ENST00000637625 KBTBD4Q9NVX7 518 aa15.31■□□□□ 0.04
CACNA1A-244ENST00000637625 IRS4O14654 1257 aaPredicted RBP15.3■□□□□ 0.04
CACNA1A-244ENST00000637625 POU4F2Q12837 409 aa15.3■□□□□ 0.04
CACNA1A-244ENST00000637625 GRM2Q14416 872 aa15.3■□□□□ 0.04
CACNA1A-244ENST00000637625 ZNF34Q8IZ26 560 aa15.3■□□□□ 0.04
CACNA1A-244ENST00000637625 NLGN1Q8N2Q7 840 aa15.3■□□□□ 0.04
CACNA1A-244ENST00000637625 GPATCH3Q96I76 525 aa15.3■□□□□ 0.04
CACNA1A-244ENST00000637625 ECHDC1Q9NTX5 307 aa15.3■□□□□ 0.04
CACNA1A-244ENST00000637625 SPINT1O43278 529 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 TNNI3KQ59H18 835 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 SUSD4Q5VX71 490 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 PUS3Q9BZE2 481 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 ZSWIM4Q9H7M6 989 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 FPGT-TNNI3KV9GXZ4 949 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 TTC41PQ6P2S7 1318 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 CDHR2Q9BYE9 1310 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 CNTNAP4Q9C0A0 1308 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 USP42Q9H9J4 1324 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 DDX60Q8IY21 1712 aaKnown RBP15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 TLDC2A0PJX2 215 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 CCDC57Q2TAC2 916 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 BICDL1Q6ZP65 573 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 ATG9AQ7Z3C6 839 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 GLIS3Q8NEA6 775 aa15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 RNF166Q96A37 237 aaPredicted RBP15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 NIP7Q9Y221 180 aaKnown RBP eCLIP15.29■□□□□ 0.04
CACNA1A-244ENST00000637625 C4BP0C0L5 1744 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 ERC2O15083 957 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 GLRX3O76003 335 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 SMPD1P17405 629 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 CTSWP56202 376 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 TYRO3Q06418 890 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 TAF7LQ5H9L4 462 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 KRT27Q7Z3Y8 459 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 GALNT12Q8IXK2 581 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 C3orf58Q8NDZ4 430 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 TRIM56Q9BRZ2 755 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 FNDC3AQ9Y2H6 1198 aaKnown RBP15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 SPEF2Q9C093 1822 aa15.28■□□□□ 0.04
CACNA1A-244ENST00000637625 ANKRD62A6NC57 917 aa15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 CHMLP26374 656 aa15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 MAP3K10Q02779 954 aa15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 CNTROBQ8N137 903 aa15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 GPRASP2Q96D09 838 aa15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 PLA2G12BQ9BX93 195 aa15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 GREM2Q9H772 168 aa15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 DBNLQ9UJU6 430 aaKnown RBP15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 GPC6Q9Y625 555 aaPredicted RBP15.27■□□□□ 0.04
CACNA1A-244ENST00000637625 C4AP0C0L4 1744 aa15.27■□□□□ 0.03
CACNA1A-244ENST00000637625 EYA2O00167 538 aa15.27■□□□□ 0.03
CACNA1A-244ENST00000637625 HCLS1P14317 486 aaPredicted RBP15.27■□□□□ 0.03
CACNA1A-244ENST00000637625 PRICKLE2Q7Z3G6 844 aa15.27■□□□□ 0.03
CACNA1A-244ENST00000637625 DBNDD2Q9BQY9 259 aa15.27■□□□□ 0.03
CACNA1A-244ENST00000637625 BOLA2Q9H3K6 86 aa15.27■□□□□ 0.03
CACNA1A-244ENST00000637625 POLMQ9NP87 494 aaPredicted RBP15.27■□□□□ 0.03
CACNA1A-244ENST00000637625 LATS2Q9NRM7 1088 aa15.27■□□□□ 0.03
CACNA1A-244ENST00000637625 SRP68Q9UHB9 627 aaKnown RBP15.27■□□□□ 0.03
CACNA1A-244ENST00000637625 LAMB2P55268 1798 aa15.26■□□□□ 0.03
CACNA1A-244ENST00000637625 CASZ1Q86V15 1759 aa15.26■□□□□ 0.03
CACNA1A-244ENST00000637625 ZNF609O15014 1411 aa15.26■□□□□ 0.03
CACNA1A-244ENST00000637625 ITGA6P23229 1130 aa15.26■□□□□ 0.03
CACNA1A-244ENST00000637625 IFIT5Q13325 482 aaKnown RBP15.26■□□□□ 0.03
CACNA1A-244ENST00000637625 TTLL11Q8NHH1 800 aa15.26■□□□□ 0.03
CACNA1A-244ENST00000637625 IL25Q9H293 177 aa15.26■□□□□ 0.03
CACNA1A-244ENST00000637625 SH3TC1Q8TE82 1336 aa15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 PDE8AO60658 829 aa15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 TRIM37O94972 964 aa15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 CSF1RP07333 972 aa15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 NEUROD6Q96NK8 337 aa15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 UTP14AQ9BVJ6 771 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 ZNF652Q9Y2D9 606 aa15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 IL15P40933 162 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 ILDR2Q71H61 639 aa15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 HPS1Q92902 700 aa15.25■□□□□ 0.03
CACNA1A-244ENST00000637625 TOR4AQ9NXH8 423 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms