RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 MROH7-TTC4A0A0A0MT08 1334 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 SYCE3A1L190 88 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 ECE2O60344 883 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 RNF40O75150 1001 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 GPSM2P81274 684 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 HDLBPQ00341 1268 aaKnown RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 RDH13Q8NBN7 331 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 TBC1D16Q8TBP0 767 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 PUS7LQ9H0K6 701 aaKnown RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 RABGAP1Q9Y3P9 1069 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 M0R2C6 588 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 NEMFO60524 1076 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 CUTAO60888 179 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 TOMM70O94826 608 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 IRX3P78415 501 aaPredicted RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 TSGA10IPQ3SY00 556 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 LCORLQ8N3X6 602 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 EXOC1Q9NV70 894 aa6.26□□□□□ -1.41
CHD2-227ENST00000637572 BIN2Q9UBW5 565 aaPredicted RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 PDS5AQ29RF7 1337 aaKnown RBP6.26□□□□□ -1.41
CHD2-227ENST00000637572 TOPAZ1Q8N9V7 1692 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 RPS12P25398 132 aaKnown RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 CRKP46108 304 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 TRAPPC10P48553 1259 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 DNM1Q05193 864 aaKnown RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 BRDTQ58F21 947 aaPredicted RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 CT47A1Q5JQC4 288 aaPredicted RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 RRAGBQ5VZM2 374 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 ANO1Q5XXA6 986 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 KRT40Q6A162 431 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 APOBEC3FQ8IUX4 373 aaKnown RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 DHX37Q8IY37 1157 aaKnown RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 REXO1Q8N1G1 1221 aaKnown RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 MTMR14Q8NCE2 650 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 CTAGE1Q96RT6 745 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 ALDH8A1Q9H2A2 487 aaPredicted RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 RRAGCQ9HB90 399 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 ZNRF3Q9ULT6 936 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 ELP1O95163 1332 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 TTLL13PA6NNM8 815 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 TMEM179Q6ZVK1 233 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 ARMC9Q7Z3E5 817 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 FBXO33Q7Z6M2 555 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 ZNF589Q86UQ0 364 aaPredicted RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 TCP10L2B9ZVM9 353 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 ASNSP08243 561 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 POTEJP0CG39 1038 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 CPA1P15085 419 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 DESP17661 470 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 PLS1Q14651 629 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 ME3Q16798 604 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 FAM47AQ5JRC9 791 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 COL13A1Q5TAT6 717 aaPredicted RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 SLFN13Q68D06 897 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 OTUD7BQ6GQQ9 843 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 HHIPL2Q6UWX4 724 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 FAM160B2Q86V87 743 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 NOC3LQ8WTT2 800 aaKnown RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 FAM208AQ9UK61 1670 aaKnown RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 UBN2Q6ZU65 1347 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 IQCA1LA6NCM1 817 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 KLRF2D3W0D1 207 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 PSMA7O14818 248 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 SCG2P13521 617 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 IDEP14735 1019 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 PDIA3P30101 505 aaKnown RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 CAMK4Q16566 473 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 CFAP100Q494V2 611 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 APOA5Q6Q788 366 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 CCDC150Q8NCX0 1101 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 SMC1BQ8NDV3 1235 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 HERC5Q9UII4 1024 aaKnown RBP6.25□□□□□ -1.41
CHD2-227ENST00000637572 CNPY2Q9Y2B0 182 aa6.25□□□□□ -1.41
CHD2-227ENST00000637572 PHLPP1O60346 1717 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 RAD17O75943 681 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 BRD1O95696 1058 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 FDX1P10109 184 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 RXRAP19793 462 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 RDXP35241 583 aaKnown RBP6.24□□□□□ -1.41
CHD2-227ENST00000637572 IREB2P48200 963 aaKnown RBP6.24□□□□□ -1.41
CHD2-227ENST00000637572 FAM160A1Q05DH4 1040 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 CUL4AQ13619 759 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 ODF2Q5BJF6 829 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 TTC38Q5R3I4 469 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 C9orf131Q5VYM1 1079 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 VPS36Q86VN1 386 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 SCLT1Q96NL6 688 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 ZNF609O15014 1411 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 BICDL2A1A5D9 508 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 LAD1O00515 517 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 SH2B2O14492 632 aaPredicted RBP6.24□□□□□ -1.41
CHD2-227ENST00000637572 IFNAR1P17181 557 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 ZNF165P49910 485 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 GSDMDP57764 484 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 ARHGEF6Q15052 776 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 PI16Q6UXB8 463 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 NMRK2Q9NPI5 230 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 GINM1Q9NU53 330 aa6.24□□□□□ -1.41
CHD2-227ENST00000637572 PALD1Q9ULE6 856 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms