RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 USP17L11C9JVI0 530 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 USP17L18D6R9N7 530 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 USP17L22D6RA61 530 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 USP17L17D6RBQ6 530 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 USP17L19D6RCP7 530 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 USP17L20D6RJB6 530 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 KDM4AO75164 1064 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 ZKSCAN1P17029 563 aaPredicted RBP10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 RBM25P49756 843 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 USP17L24Q0WX57 530 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 MOGSQ13724 837 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 TREML2Q5T2D2 321 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 NCOA7Q8NI08 942 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 LPAR1Q92633 364 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 C12orf42Q96LP6 360 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 VCPKMTQ9H867 229 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 ISY1Q9ULR0 285 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 TACC3Q9Y6A5 838 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 NEDD4P46934 1319 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 PLIN4Q96Q06 1357 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 IGKV6D-41A0A0C4DH26 115 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 ERICH2A1L162 156 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 E7EWF7 191 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 GPR25O00155 361 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 TLR2O60603 784 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 FKTNO75072 461 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 CYP2C8P10632 490 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 HSPA8P11142 646 aaKnown RBP10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 VCAM1P19320 739 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 HOXA7P31268 230 aaPredicted RBP10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 KIF22Q14807 665 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 CREB3L3Q68CJ9 461 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 MKL1Q969V6 931 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 ZKSCAN3Q9BRR0 538 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 UBAC1Q9BSL1 405 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 CFHR5Q9BXR6 569 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 TANGO6Q9C0B7 1094 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 NBPF3Q9H094 633 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 RPAP3Q9H6T3 665 aaPredicted RBP10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 TCP11L1Q9NUJ3 509 aa10.82□□□□□ -0.68
CACNA1A-239ENST00000637297 F5H6K3 240 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 SLC27A2O14975 620 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 WDR46O15213 610 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 NMT2O60551 498 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 MCCP23508 829 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 KLRC3Q07444 240 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 SART3Q15020 963 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 NECTIN1Q15223 517 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 SIAH1Q8IUQ4 282 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 LRRC47Q8N1G4 583 aaKnown RBP10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 TTC14Q96N46 770 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 ASCC2Q9H1I8 757 aaPredicted RBP10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 R3HDMLQ9H3Y0 253 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 IL17RBQ9NRM6 502 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 ZSWIM5Q9P217 1185 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 CPA4Q9UI42 421 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 SYNPO2Q9UMS6 1093 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 MTMR7Q9Y216 660 aa10.81□□□□□ -0.68
CACNA1A-239ENST00000637297 FLOT1O75955 427 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 TOP1P11387 765 aaKnown RBP10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 SLC1A4P43007 532 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 GCLCP48506 637 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 SP3Q02447 781 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 KRT32Q14532 448 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 COG2Q14746 738 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 ARHGEF6Q15052 776 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 SLFN13Q68D06 897 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 CATSPERGQ6ZRH7 1159 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 DGKHQ86XP1 1220 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 CCAR1Q8IX12 1150 aaKnown RBP10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 ANKRD13CQ8N6S4 541 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 GTF3C2Q8WUA4 911 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 ZNF296Q8WUU4 475 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 CHMP4CQ96CF2 233 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 ERO1AQ96HE7 468 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 ZSCAN10Q96SZ4 725 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 P2RX7Q99572 595 aaKnown RBP10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 PRDM10Q9NQV6 1147 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 HOXC10Q9NYD6 342 aa10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 CTDP1Q9Y5B0 961 aaPredicted RBP10.8□□□□□ -0.68
CACNA1A-239ENST00000637297 CEP350Q5VT06 3117 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 IFIT3O14879 490 aaKnown RBP10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 EPB41L2O43491 1005 aaKnown RBP10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 NDUFB10O96000 172 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 SLC4A3P48751 1232 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 HERVK_113P62684 666 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 IKQ13123 557 aaPredicted RBP10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 NOM1Q5C9Z4 860 aaKnown RBP10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 FAM83BQ5T0W9 1011 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 C17orf99Q6UX52 265 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 GMCL1P1Q8NEA9 526 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 TMEM47Q9BQJ4 181 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 PAGR1Q9BTK6 254 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 KAT14Q9H8E8 782 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 TNKSO95271 1327 aa10.79□□□□□ -0.68
CACNA1A-239ENST00000637297 BMP3P12645 472 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms