RNA–Protein interactions for RNA: ENST00000636420.1

PCCA-212, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-212ENST00000636420 MED23Q9ULK4 1368 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 USP17L3A6NCW0 530 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 USP17L4A6NCW7 530 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 APBB1O00213 710 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 ZSCAN12O43309 604 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 DHX16O60231 1041 aaKnown RBP9.12□□□□□ -0.95
PCCA-212ENST00000636420 NR1I2O75469 434 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 GUCY2CP25092 1073 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 ACTN2P35609 894 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 MAGEA9P43362 315 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 TNNT3P45378 269 aaPredicted RBP9.12□□□□□ -0.95
PCCA-212ENST00000636420 RPS8P62241 208 aaKnown RBP9.12□□□□□ -0.95
PCCA-212ENST00000636420 ERCC6LQ2NKX8 1250 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
PCCA-212ENST00000636420 SWT1Q5T5J6 900 aaKnown RBP9.12□□□□□ -0.95
PCCA-212ENST00000636420 CC2D1AQ6P1N0 951 aaPredicted RBP9.12□□□□□ -0.95
PCCA-212ENST00000636420 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
PCCA-212ENST00000636420 MAMSTRQ6ZN01 415 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 CCDC73Q6ZRK6 1079 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 Q7L0L9 218 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 RSRC2Q7L4I2 434 aaKnown RBP9.12□□□□□ -0.95
PCCA-212ENST00000636420 USP17L1Q7RTZ2 530 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 NBPF11Q86T75 865 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 CKAP2LQ8IYA6 745 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 MNS1Q8NEH6 495 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 ENGASEQ8NFI3 743 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 NCAPGQ9BPX3 1015 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 TACO1Q9BSH4 297 aaKnown RBP9.12□□□□□ -0.95
PCCA-212ENST00000636420 ARHGAP39Q9C0H5 1083 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 TMX1Q9H3N1 280 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 ARFGAP3Q9NP61 516 aa9.12□□□□□ -0.95
PCCA-212ENST00000636420 MAP2K7O14733 419 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 CBFA2T2O43439 604 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 KINO60870 393 aaKnown RBP9.11□□□□□ -0.95
PCCA-212ENST00000636420 RPS6KB1P23443 525 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 USP5P45974 858 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 HSP90AB3PQ58FF7 597 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 CREB3L3Q68CJ9 461 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 GPR153Q6NV75 609 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 SYT10Q6XYQ8 523 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 COPS6Q7L5N1 327 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 CCAR1Q8IX12 1150 aaKnown RBP9.11□□□□□ -0.95
PCCA-212ENST00000636420 SMARCC2Q8TAQ2 1214 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 XAGE3Q8WTP9 111 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 FAM89AQ96GI7 184 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 MS4A4AQ96JQ5 239 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 ZNF396Q96N95 335 aaPredicted RBP9.11□□□□□ -0.95
PCCA-212ENST00000636420 USP44Q9H0E7 712 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 ECHDC1Q9NTX5 307 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 MTMR10Q9NXD2 777 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 RSPH14Q9UHP6 348 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 TPCN1Q9ULQ1 816 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 PCDHB13Q9Y5F0 798 aa9.11□□□□□ -0.95
PCCA-212ENST00000636420 COL1A1P02452 1464 aaPredicted RBP9.1□□□□□ -0.95
PCCA-212ENST00000636420 OAS2P29728 719 aaKnown RBP9.1□□□□□ -0.95
PCCA-212ENST00000636420 SMC1AQ14683 1233 aaKnown RBP9.1□□□□□ -0.95
PCCA-212ENST00000636420 CAMK4Q16566 473 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 TRIM65Q6PJ69 517 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 BLOC1S2Q6QNY1 142 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 KRBA2Q6ZNG9 492 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 C11orf57Q6ZUT1 292 aaPredicted RBP9.1□□□□□ -0.95
PCCA-212ENST00000636420 PODNQ7Z5L7 613 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 ZNF467Q7Z7K2 595 aaPredicted RBP9.1□□□□□ -0.95
PCCA-212ENST00000636420 APOBEC3FQ8IUX4 373 aaKnown RBP9.1□□□□□ -0.95
PCCA-212ENST00000636420 DEFB123Q8N688 67 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 CCDC191Q8NCU4 936 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 PPM1EQ8WY54 764 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 GTF3C6Q969F1 213 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 MYCBPQ99417 103 aaPredicted RBP9.1□□□□□ -0.95
PCCA-212ENST00000636420 ISCA1Q9BUE6 129 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 GGA1Q9UJY5 639 aa9.1□□□□□ -0.95
PCCA-212ENST00000636420 UNCXA6NJT0 531 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 EIF3JO75822 258 aaKnown RBP9.09□□□□□ -0.95
PCCA-212ENST00000636420 CTGFP29279 349 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 MAP3K9P80192 1104 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 TSHZ3Q63HK5 1081 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 LEKR1Q6ZMV7 388 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 BRI3BPQ8WY22 251 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 FUT8Q9BYC5 575 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 DEFB129Q9H1M3 183 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 PRDM6Q9NQX0 595 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 ST7Q9NRC1 585 aa9.09□□□□□ -0.95
PCCA-212ENST00000636420 RRP15Q9Y3B9 282 aaKnown RBP9.09□□□□□ -0.95
PCCA-212ENST00000636420 VCANP13611 3396 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 G3V3G9 751 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 SLC27A2O14975 620 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 ARHGAP6O43182 974 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 USP2O75604 605 aaPredicted RBP9.08□□□□□ -0.96
PCCA-212ENST00000636420 HMGB1P09429 215 aaKnown RBP9.08□□□□□ -0.96
PCCA-212ENST00000636420 ADD1P35611 737 aaKnown RBP9.08□□□□□ -0.96
PCCA-212ENST00000636420 GJA8P48165 433 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 OTUD7BQ6GQQ9 843 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 ARMCX5Q6P1M9 558 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 G2E3Q7L622 706 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.08□□□□□ -0.96
PCCA-212ENST00000636420 REXO1L1PQ8IX06 675 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 ELOA2Q8IYF1 753 aaPredicted RBP9.08□□□□□ -0.96
PCCA-212ENST00000636420 FBXL16Q8N461 479 aa9.08□□□□□ -0.96
PCCA-212ENST00000636420 SMARCE1Q969G3 411 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms