RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 INTS13Q9NVM9 706 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.16□□□□□ -1.26
GABRA1-213ENST00000636340 RIPOR2Q9Y4F9 1068 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.16□□□□□ -1.26
GABRA1-213ENST00000636340 AFF2P51816 1311 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 PHLPP2Q6ZVD8 1323 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 PCDH11XQ9BZA7 1347 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 PCDH11YQ9BZA8 1340 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 SHANK3Q9BYB0 1731 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 TLL1O43897 1013 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 BMP6P22004 513 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 METAP2P50579 478 aaKnown RBP eCLIP7.16□□□□□ -1.26
GABRA1-213ENST00000636340 PDE4CQ08493 712 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 PNOCQ13519 176 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 APOA5Q6Q788 366 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 ELOA2Q8IYF1 753 aaPredicted RBP7.16□□□□□ -1.26
GABRA1-213ENST00000636340 CLIC6Q96NY7 704 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 SLC4A5Q9BY07 1137 aa7.16□□□□□ -1.26
GABRA1-213ENST00000636340 PIH1D3Q9NQM4 214 aaKnown RBP7.16□□□□□ -1.26
GABRA1-213ENST00000636340 SPATA31A6Q5VVP1 1343 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 WDR17Q8IZU2 1322 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 TCRBV5S4A2TA0A5A2 114 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 TMEM232C9JQI7 657 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 MYO1BO43795 1136 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 CUTAO60888 179 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 EMP3P54852 163 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 UBASH3AP57075 661 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 EVA1CP58658 441 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 COPS2P61201 443 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 PDE4BQ07343 736 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 TBX2Q13207 712 aaPredicted RBP7.15□□□□□ -1.26
GABRA1-213ENST00000636340 UBE3CQ15386 1083 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 LONRF3Q496Y0 759 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 KRBA2Q6ZNG9 492 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 SGMS1Q86VZ5 419 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 FCHSD1Q86WN1 690 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 VGLL2Q8N8G2 317 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 ZBTB38Q8NAP3 1195 aaPredicted RBP7.15□□□□□ -1.26
GABRA1-213ENST00000636340 FAM89AQ96GI7 184 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 LY9Q9HBG7 655 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 GNEQ9Y223 722 aaKnown RBP7.15□□□□□ -1.26
GABRA1-213ENST00000636340 FHOD1Q9Y613 1164 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 TACC3Q9Y6A5 838 aa7.15□□□□□ -1.26
GABRA1-213ENST00000636340 NID2Q14112 1375 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 MAP3K15Q6ZN16 1313 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 UBN2Q6ZU65 1347 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 UBE2Q2LH0YL09 131 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 CBFA2T2O43439 604 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 CDKL5O76039 1030 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 ZRANB2O95218 330 aaKnown RBP eCLIP7.15□□□□□ -1.27
GABRA1-213ENST00000636340 RXRAP19793 462 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 IFIT5Q13325 482 aaKnown RBP7.15□□□□□ -1.27
GABRA1-213ENST00000636340 CAPN12Q6ZSI9 719 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 STK11IPQ8N1F8 1099 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 SYNE4Q8N205 404 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 FAM160A2Q8N612 972 aaPredicted RBP7.15□□□□□ -1.27
GABRA1-213ENST00000636340 JMYQ8N9B5 988 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 PLPP7Q8NBV4 271 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 PHKBQ93100 1093 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 CCDC85AQ96PX6 553 aaPredicted RBP7.15□□□□□ -1.27
GABRA1-213ENST00000636340 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.15□□□□□ -1.27
GABRA1-213ENST00000636340 ST7Q9NRC1 585 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 FANCLQ9NW38 375 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 USP21Q9UK80 565 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 PCDHA5Q9Y5H7 936 aa7.15□□□□□ -1.27
GABRA1-213ENST00000636340 COL14A1Q05707 1796 aaKnown RBP7.15□□□□□ -1.27
GABRA1-213ENST00000636340 COL5A2P05997 1499 aaPredicted RBP7.14□□□□□ -1.27
GABRA1-213ENST00000636340 NRAPQ86VF7 1730 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 TOGARAM1Q9Y4F4 1720 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 CDHR2Q9BYE9 1310 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 STK36Q9NRP7 1315 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 VWA3AA6NCI4 1184 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 SNPHO15079 494 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 CCP110O43303 1012 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 TADA3O75528 432 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 TOB1P50616 345 aaPredicted RBP7.14□□□□□ -1.27
GABRA1-213ENST00000636340 GOLGA8FQ08AF8 430 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 GOLGA8DPQ0D2H9 430 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 DPYDQ12882 1025 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 TRDNQ13061 729 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 ALX1Q15699 326 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 SLC9C2Q5TAH2 1124 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 NT5DC1Q5TFE4 455 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 TOM1L2Q6ZVM7 507 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 ZNF771Q7L3S4 317 aaPredicted RBP7.14□□□□□ -1.27
GABRA1-213ENST00000636340 PNMA1Q8ND90 353 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 TTLL11Q8NHH1 800 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 TMEM87BQ96K49 555 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 STRBPQ96SI9 672 aaKnown RBP7.14□□□□□ -1.27
GABRA1-213ENST00000636340 RGS17Q9UGC6 210 aaPredicted RBP7.14□□□□□ -1.27
GABRA1-213ENST00000636340 DNAI1Q9UI46 699 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 KCNH3Q9ULD8 1083 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 PARP3Q9Y6F1 533 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 MYO5AQ9Y4I1 1855 aaKnown RBP7.14□□□□□ -1.27
GABRA1-213ENST00000636340 BCL9LQ86UU0 1499 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 ZNF532Q9HCE3 1301 aa7.14□□□□□ -1.27
GABRA1-213ENST00000636340 FAM196BA6NMK8 535 aa7.13□□□□□ -1.27
GABRA1-213ENST00000636340 B4E1Z4 1266 aa7.13□□□□□ -1.27
GABRA1-213ENST00000636340 NPHP1O15259 732 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms