RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 SKOR1P84550 965 aa12.13□□□□□ -0.47
CHD2-223ENST00000636306 STIM1Q13586 685 aa12.13□□□□□ -0.47
CHD2-223ENST00000636306 TOB2Q14106 344 aaPredicted RBP12.13□□□□□ -0.47
CHD2-223ENST00000636306 CEP85LQ5SZL2 805 aa12.13□□□□□ -0.47
CHD2-223ENST00000636306 FAM177A1Q8N128 213 aaPredicted RBP12.13□□□□□ -0.47
CHD2-223ENST00000636306 VGLL2Q8N8G2 317 aa12.13□□□□□ -0.47
CHD2-223ENST00000636306 BCAS4Q8TDM0 211 aa12.13□□□□□ -0.47
CHD2-223ENST00000636306 MRPS27Q92552 414 aaKnown RBP12.13□□□□□ -0.47
CHD2-223ENST00000636306 BORCS6Q96GS4 357 aa12.13□□□□□ -0.47
CHD2-223ENST00000636306 CCDC85AQ96PX6 553 aaPredicted RBP12.13□□□□□ -0.47
CHD2-223ENST00000636306 CDC5LQ99459 802 aaKnown RBP12.13□□□□□ -0.47
CHD2-223ENST00000636306 VCPKMTQ9H867 229 aa12.13□□□□□ -0.47
CHD2-223ENST00000636306 NDUFB9Q9Y6M9 179 aa12.13□□□□□ -0.47
CHD2-223ENST00000636306 BTAF1O14981 1849 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 WDR19Q8NEZ3 1342 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
CHD2-223ENST00000636306 COL24A1Q17RW2 1714 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 A0A1B0GUL6 1792 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 CASZ1Q86V15 1759 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 UBAP1LF5GYI3 381 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 H3BQV1 296 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 MYO1FO00160 1098 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 ZEB2O60315 1214 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 SNUPNO95149 360 aaKnown RBP12.12□□□□□ -0.47
CHD2-223ENST00000636306 CCDC175P0C221 793 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 SLC8A1P32418 973 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 CCNHP51946 323 aaPredicted RBP12.12□□□□□ -0.47
CHD2-223ENST00000636306 PDCD2Q16342 344 aaPredicted RBP12.12□□□□□ -0.47
CHD2-223ENST00000636306 IFFO2Q5TF58 517 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 NGLY1Q96IV0 654 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 SEC62Q99442 399 aaKnown RBP12.12□□□□□ -0.47
CHD2-223ENST00000636306 SDF4Q9BRK5 362 aa12.12□□□□□ -0.47
CHD2-223ENST00000636306 ACTR5Q9H9F9 607 aaPredicted RBP12.12□□□□□ -0.47
CHD2-223ENST00000636306 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
CHD2-223ENST00000636306 TARSL2A2RTX5 802 aaKnown RBP12.11□□□□□ -0.47
CHD2-223ENST00000636306 PFKFB2O60825 505 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 ZAP70P43403 619 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 ACTN3Q08043 901 aaPredicted RBP12.11□□□□□ -0.47
CHD2-223ENST00000636306 UBE3CQ15386 1083 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 SNCBQ16143 134 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 DPCR1Q3MIW9 517 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 Q6ZUG5 572 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 TAX1BP1Q86VP1 789 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 BRF1Q92994 677 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 SUGCTQ9HAC7 445 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
CHD2-223ENST00000636306 PUF60Q9UHX1 559 aaKnown RBP12.11□□□□□ -0.47
CHD2-223ENST00000636306 MYO6Q9UM54 1294 aa12.11□□□□□ -0.47
CHD2-223ENST00000636306 NIP7Q9Y221 180 aaKnown RBP eCLIP12.11□□□□□ -0.47
CHD2-223ENST00000636306 CTAGE9A4FU28 777 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 GOLGA6CA6NDK9 693 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 SRRM3A6NNA2 597 aaPredicted RBP12.1□□□□□ -0.47
CHD2-223ENST00000636306 NTSR2O95665 410 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 GOLGA6DP0CG33 693 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 CDR1P51861 262 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 IFFO1Q0D2I5 559 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 ITPK1Q13572 414 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 CCDC40Q4G0X9 1142 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 FILIP1LQ4L180 1135 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 SUSD4Q5VX71 490 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
CHD2-223ENST00000636306 FBXL16Q8N461 479 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 COG1Q8WTW3 980 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 PSMD1Q99460 953 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 SH3GL2Q99962 352 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 NAA15Q9BXJ9 866 aaKnown RBP12.1□□□□□ -0.47
CHD2-223ENST00000636306 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
CHD2-223ENST00000636306 GOLGA6AQ9NYA3 693 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 ZMYM6O95789 1325 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 BCL9LQ86UU0 1499 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 E7EWF7 191 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 M0R2C6 588 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 SERPINC1P01008 464 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 MYBL2P10244 700 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 ADRA2BP18089 450 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 ADD2P35612 726 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 RC3H1Q5TC82 1133 aaKnown RBP12.1□□□□□ -0.47
CHD2-223ENST00000636306 CDCA2Q69YH5 1023 aaPredicted RBP12.1□□□□□ -0.47
CHD2-223ENST00000636306 ADALQ6DHV7 355 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 RALYLQ86SE5 291 aaKnown RBP12.1□□□□□ -0.47
CHD2-223ENST00000636306 MICAL1Q8TDZ2 1067 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 CRACR2AQ9BSW2 395 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 AGXT2Q9BYV1 514 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 NYXQ9GZU5 481 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 MYO1AQ9UBC5 1043 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 GRIN2DO15399 1336 aa12.1□□□□□ -0.47
CHD2-223ENST00000636306 GOLGA6L7A0A1B0GV03 622 aa12.09□□□□□ -0.47
CHD2-223ENST00000636306 LY75O60449 1722 aa12.09□□□□□ -0.47
CHD2-223ENST00000636306 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
CHD2-223ENST00000636306 RHOXF2BP0C7M4 288 aa12.09□□□□□ -0.47
CHD2-223ENST00000636306 FGFR2P21802 821 aa12.09□□□□□ -0.47
CHD2-223ENST00000636306 MCAMP43121 646 aa12.09□□□□□ -0.47
CHD2-223ENST00000636306 USP14P54578 494 aa12.09□□□□□ -0.47
CHD2-223ENST00000636306 GNGT1P63211 74 aa12.09□□□□□ -0.47
CHD2-223ENST00000636306 MYL5Q02045 173 aa12.09□□□□□ -0.47
CHD2-223ENST00000636306 MAP3K12Q12852 859 aa12.09□□□□□ -0.47
CHD2-223ENST00000636306 FAM98CQ17RN3 349 aaKnown RBP12.09□□□□□ -0.47
CHD2-223ENST00000636306 SLC5A9Q2M3M2 681 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms