RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 VCAM1P19320 739 aa18.29■□□□□ 0.52
CLN6-211ENST00000635754 OSBPP22059 807 aa18.29■□□□□ 0.52
CLN6-211ENST00000635754 IRX3P78415 501 aaPredicted RBP18.29■□□□□ 0.52
CLN6-211ENST00000635754 SMCR8Q8TEV9 937 aaPredicted RBP18.29■□□□□ 0.52
CLN6-211ENST00000635754 KRT23Q9C075 422 aa18.29■□□□□ 0.52
CLN6-211ENST00000635754 PRDM10Q9NQV6 1147 aa18.29■□□□□ 0.52
CLN6-211ENST00000635754 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
CLN6-211ENST00000635754 CASP8AP2Q9UKL3 1982 aa18.28■□□□□ 0.52
CLN6-211ENST00000635754 HOXA7P31268 230 aaPredicted RBP18.28■□□□□ 0.52
CLN6-211ENST00000635754 TRDNQ13061 729 aa18.28■□□□□ 0.52
CLN6-211ENST00000635754 ASCC2Q9H1I8 757 aaPredicted RBP18.28■□□□□ 0.52
CLN6-211ENST00000635754 STX8Q9UNK0 236 aa18.28■□□□□ 0.52
CLN6-211ENST00000635754 B4E1Z4 1266 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 USP17L15C9J2P7 530 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 USP17L13C9JLJ4 530 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 USP17L11C9JVI0 530 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 USP17L18D6R9N7 530 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 USP17L22D6RA61 530 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 USP17L17D6RBQ6 530 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 USP17L19D6RCP7 530 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 USP17L20D6RJB6 530 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 RAD21O60216 631 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 USP17L24Q0WX57 530 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 RPAP3Q9H6T3 665 aaPredicted RBP18.27■□□□□ 0.52
CLN6-211ENST00000635754 IL17RBQ9NRM6 502 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 SYNPO2Q9UMS6 1093 aa18.27■□□□□ 0.52
CLN6-211ENST00000635754 NMT2O60551 498 aa18.26■□□□□ 0.51
CLN6-211ENST00000635754 KDM4AO75164 1064 aa18.26■□□□□ 0.51
CLN6-211ENST00000635754 REC8O95072 547 aa18.26■□□□□ 0.51
CLN6-211ENST00000635754 IQCA1Q86XH1 822 aa18.26■□□□□ 0.51
CLN6-211ENST00000635754 SPICE1Q8N0Z3 855 aa18.26■□□□□ 0.51
CLN6-211ENST00000635754 ZNF296Q8WUU4 475 aaPredicted RBP18.26■□□□□ 0.51
CLN6-211ENST00000635754 MKL1Q969V6 931 aa18.26■□□□□ 0.51
CLN6-211ENST00000635754 TCP11L1Q9NUJ3 509 aa18.26■□□□□ 0.51
CLN6-211ENST00000635754 ADGRA2Q96PE1 1338 aa18.26■□□□□ 0.51
CLN6-211ENST00000635754 WDR46O15213 610 aaKnown RBP18.25■□□□□ 0.51
CLN6-211ENST00000635754 FKTNO75072 461 aa18.25■□□□□ 0.51
CLN6-211ENST00000635754 NECTIN1Q15223 517 aa18.25■□□□□ 0.51
CLN6-211ENST00000635754 RNF20Q5VTR2 975 aa18.25■□□□□ 0.51
CLN6-211ENST00000635754 RALYLQ86SE5 291 aaKnown RBP18.25■□□□□ 0.51
CLN6-211ENST00000635754 LRRC47Q8N1G4 583 aaKnown RBP18.25■□□□□ 0.51
CLN6-211ENST00000635754 TANGO6Q9C0B7 1094 aa18.25■□□□□ 0.51
CLN6-211ENST00000635754 CPA4Q9UI42 421 aa18.25■□□□□ 0.51
CLN6-211ENST00000635754 E7EWF7 191 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 F5H6K3 240 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 SLC27A2O14975 620 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 GCLCP48506 637 aaPredicted RBP18.24■□□□□ 0.51
CLN6-211ENST00000635754 SP3Q02447 781 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 KLRC3Q07444 240 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 CCDC178Q5BJE1 867 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 KIAA1755Q5JYT7 1200 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 CREB3L3Q68CJ9 461 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 C17orf99Q6UX52 265 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 CATSPERGQ6ZRH7 1159 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 NCOA7Q8NI08 942 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 GTF3C3Q9Y5Q9 886 aa18.24■□□□□ 0.51
CLN6-211ENST00000635754 GMCL1P1Q8NEA9 526 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 TTC14Q96N46 770 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 P2RX7Q99572 595 aaKnown RBP18.23■□□□□ 0.51
CLN6-211ENST00000635754 ZKSCAN3Q9BRR0 538 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 UBAC1Q9BSL1 405 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 ZSWIM5Q9P217 1185 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 PARP14Q460N5 1801 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 NDUFB10O96000 172 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 NOVP48745 357 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 HERVK_113P62684 666 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 NKX2-3Q8TAU0 364 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 GTF3C2Q8WUA4 911 aaPredicted RBP18.23■□□□□ 0.51
CLN6-211ENST00000635754 ERO1AQ96HE7 468 aa18.23■□□□□ 0.51
CLN6-211ENST00000635754 BCRP11274 1271 aa18.22■□□□□ 0.51
CLN6-211ENST00000635754 TOP1P11387 765 aaKnown RBP18.22■□□□□ 0.51
CLN6-211ENST00000635754 KIF22Q14807 665 aa18.22■□□□□ 0.51
CLN6-211ENST00000635754 FAM83BQ5T0W9 1011 aa18.22■□□□□ 0.51
CLN6-211ENST00000635754 STOX1Q6ZVD7 989 aa18.22■□□□□ 0.51
CLN6-211ENST00000635754 ANKRD13CQ8N6S4 541 aa18.22■□□□□ 0.51
CLN6-211ENST00000635754 ZSCAN10Q96SZ4 725 aaPredicted RBP18.22■□□□□ 0.51
CLN6-211ENST00000635754 RLFQ13129 1914 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 TNKSO95271 1327 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 FLOT1O75955 427 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 ZKSCAN1P17029 563 aaPredicted RBP18.21■□□□□ 0.51
CLN6-211ENST00000635754 COG2Q14746 738 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 FAM110CQ1W6H9 321 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 SLFN13Q68D06 897 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 RCSD1Q6JBY9 416 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 DGKHQ86XP1 1220 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 HOXC10Q9NYD6 342 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 A0A0G2JMZ2 1700 aa18.21■□□□□ 0.51
CLN6-211ENST00000635754 MGAMO43451 1857 aa18.2■□□□□ 0.5
CLN6-211ENST00000635754 MYPNQ86TC9 1320 aa18.2■□□□□ 0.5
CLN6-211ENST00000635754 EPB41L2O43491 1005 aaKnown RBP18.2■□□□□ 0.5
CLN6-211ENST00000635754 LACTBP83111 547 aaPredicted RBP18.2■□□□□ 0.5
CLN6-211ENST00000635754 CYB5R4Q7L1T6 521 aa18.2■□□□□ 0.5
CLN6-211ENST00000635754 CD99L2Q8TCZ2 262 aa18.2■□□□□ 0.5
CLN6-211ENST00000635754 GMCL1Q96IK5 515 aa18.2■□□□□ 0.5
CLN6-211ENST00000635754 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
CLN6-211ENST00000635754 TMEM47Q9BQJ4 181 aa18.2■□□□□ 0.5
CLN6-211ENST00000635754 ZSWIM8A7E2V4 1837 aa18.19■□□□□ 0.5
CLN6-211ENST00000635754 SPDYE16A6NNV3 312 aaPredicted RBP18.19■□□□□ 0.5
CLN6-211ENST00000635754 SART3Q15020 963 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms