RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 AMPD3Q01432 767 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 TBX2Q13207 712 aaPredicted RBP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 PTPAQ15257 358 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 KRT31Q15323 416 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 CEP57Q86XR8 500 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 IFT20Q8IY31 132 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 ANKZF1Q9H8Y5 726 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 VPS54Q9P1Q0 977 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 HPS5Q9UPZ3 1129 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 V9GY48 417 aaPredicted RBP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 H7C1W4 665 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 TULP1O00294 542 aaPredicted RBP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 STARD3NLO95772 234 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 CALM1P0DP23 149 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 CALM2P0DP24 149 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 CALM3P0DP25 149 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 DNM2P50570 870 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 UBE3CQ15386 1083 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 CSGALNACT2Q8N6G5 542 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 FANCBQ8NB91 859 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 MMRN2Q9H8L6 949 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 FAM184BQ9ULE4 1060 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 ERBB3P21860 1342 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 PATL2C9JE40 543 aaKnown RBP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 GTPBP6O43824 516 aaPredicted RBP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 EZRP15311 586 aaKnown RBP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 CDC27P30260 824 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 GGCXP38435 758 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 CCDC178Q5BJE1 867 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 TOM1L2Q6ZVM7 507 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 CMTR1Q8N1G2 835 aaKnown RBP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 NOA1Q8NC60 698 aaKnown RBP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 FAM89AQ96GI7 184 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 PAGE5Q96GU1 130 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 ADD3Q9UEY8 706 aaKnown RBP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 PHKG2P15735 406 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 PDE6AP16499 860 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 LRRC31Q6UY01 552 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 TTLL7Q6ZT98 887 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 FBXL16Q8N461 479 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 SELENOOQ9BVL4 669 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 YY1AP1Q9H869 796 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 ARMT1Q9H993 441 aa9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 AATFQ9NY61 560 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMARCA2-246ENST00000635739 STK36Q9NRP7 1315 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 NUTM2BA6NNL0 878 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 NUTM2EB1AL46 878 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 COBLO75128 1261 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 A1BGP04217 495 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 TCP1P17987 556 aaKnown RBP9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 IFNL3Q8IZI9 196 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 NOC4LQ9BVI4 516 aaKnown RBP9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 RICTORQ6R327 1708 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 CCDC172P0C7W6 258 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 CALML3P27482 149 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 KIF5BP33176 963 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 ADD2P35612 726 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 ANTXR2P58335 489 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 PAK2Q13177 524 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 DTHD1Q6ZMT9 781 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 EPSTI1Q96J88 318 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 CABS1Q96KC9 395 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 HINFPQ9BQA5 517 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 RBM28Q9NW13 759 aaKnown RBP9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 RWDD2AQ9UIY3 292 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 ZNF18P17022 549 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 ATP1A2P50993 1020 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 FXR1P51114 621 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 ASIC1P78348 528 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 IFFO1Q0D2I5 559 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 CYB5R4Q7L1T6 521 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 ATG9AQ7Z3C6 839 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 FOXP4Q8IVH2 680 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 PSMB7Q99436 277 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 TSG101Q99816 390 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 IFIH1Q9BYX4 1025 aaKnown RBP9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 FBXO2Q9UK22 296 aaPredicted RBP9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 SAMM50Q9Y512 469 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 UBN2Q6ZU65 1347 aa9.38□□□□□ -0.91
SMARCA2-246ENST00000635739 TARSL2A2RTX5 802 aaKnown RBP9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 MAGEA1P43355 309 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 TTC19Q6DKK2 380 aaPredicted RBP9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 WDR93Q6P2C0 686 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 PI16Q6UXB8 463 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 FNBP4Q8N3X1 1017 aaPredicted RBP9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 MSL3Q8N5Y2 521 aaKnown RBP9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 ZSWIM5Q9P217 1185 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 CPDO75976 1380 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 ATP2C2O75185 946 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 PARP1P09874 1014 aaKnown RBP9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 CYP7A1P22680 504 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 EPHB4P54760 987 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 PIK3AP1Q6ZUJ8 805 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 PAXIP1Q6ZW49 1069 aaPredicted RBP9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 TBC1D10CQ8IV04 446 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 TMX4Q9H1E5 349 aaPredicted RBP9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 HYOU1Q9Y4L1 999 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 PLEKHG2Q9H7P9 1386 aa9.37□□□□□ -0.91
SMARCA2-246ENST00000635739 JCADQ9P266 1359 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms