RNA–Protein interactions for RNA: ENST00000632758.1

LIMS4-203, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best)

Gene LIMS4, Length 1,580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-203ENST00000632758 ANKRD13AQ8IZ07 590 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 CNKSR2Q8WXI2 1034 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 ELP3Q9H9T3 547 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 ZHX2Q9Y6X8 837 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 GREB1LQ9C091 1923 aaPredicted RBP17.28■□□□□ 0.36
LIMS4-203ENST00000632758 MYH8P13535 1937 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 TOMM70O94826 608 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 CDC27P30260 824 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 PPP4R3BQ5MIZ7 849 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 SPRYD3Q8NCJ5 442 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 SMC1BQ8NDV3 1235 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 SH2B1Q9NRF2 756 aaPredicted RBP17.28■□□□□ 0.36
LIMS4-203ENST00000632758 FAM217BQ9NTX9 383 aaPredicted RBP17.28■□□□□ 0.36
LIMS4-203ENST00000632758 CSADQ9Y600 493 aa17.28■□□□□ 0.36
LIMS4-203ENST00000632758 PASKQ96RG2 1323 aa17.27■□□□□ 0.36
LIMS4-203ENST00000632758 GOLGA8AA7E2F4 631 aa17.27■□□□□ 0.35
LIMS4-203ENST00000632758 ADD1P35611 737 aaKnown RBP17.27■□□□□ 0.35
LIMS4-203ENST00000632758 METAP2P50579 478 aaKnown RBP eCLIP17.27■□□□□ 0.35
LIMS4-203ENST00000632758 KIAA1755Q5JYT7 1200 aa17.27■□□□□ 0.35
LIMS4-203ENST00000632758 C2orf69Q8N8R5 385 aa17.27■□□□□ 0.35
LIMS4-203ENST00000632758 FANCBQ8NB91 859 aa17.27■□□□□ 0.35
LIMS4-203ENST00000632758 ARHGEF10LQ9HCE6 1279 aa17.27■□□□□ 0.35
LIMS4-203ENST00000632758 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.35
LIMS4-203ENST00000632758 TMX2Q9Y320 296 aa17.27■□□□□ 0.35
LIMS4-203ENST00000632758 F5H6K3 240 aa17.26■□□□□ 0.35
LIMS4-203ENST00000632758 RAD21O60216 631 aa17.26■□□□□ 0.35
LIMS4-203ENST00000632758 DDAH1O94760 285 aa17.26■□□□□ 0.35
LIMS4-203ENST00000632758 KLRC3Q07444 240 aa17.26■□□□□ 0.35
LIMS4-203ENST00000632758 SPP2Q13103 211 aa17.26■□□□□ 0.35
LIMS4-203ENST00000632758 DGKZQ13574 1117 aa17.26■□□□□ 0.35
LIMS4-203ENST00000632758 CUL4AQ13619 759 aa17.26■□□□□ 0.35
LIMS4-203ENST00000632758 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
LIMS4-203ENST00000632758 RBM46Q8TBY0 533 aaKnown RBP17.26■□□□□ 0.35
LIMS4-203ENST00000632758 GTF3C6Q969F1 213 aa17.26■□□□□ 0.35
LIMS4-203ENST00000632758 PPFIA3O75145 1194 aa17.25■□□□□ 0.35
LIMS4-203ENST00000632758 FKBP1BP68106 108 aa17.25■□□□□ 0.35
LIMS4-203ENST00000632758 USP17L2Q6R6M4 530 aa17.25■□□□□ 0.35
LIMS4-203ENST00000632758 WDR18Q9BV38 432 aa17.25■□□□□ 0.35
LIMS4-203ENST00000632758 TRIM75PA6NK02 468 aa17.24■□□□□ 0.35
LIMS4-203ENST00000632758 GOLGA8HP0CJ92 632 aa17.24■□□□□ 0.35
LIMS4-203ENST00000632758 PDHBP11177 359 aa17.24■□□□□ 0.35
LIMS4-203ENST00000632758 RTN1Q16799 776 aa17.24■□□□□ 0.35
LIMS4-203ENST00000632758 SLFN13Q68D06 897 aa17.24■□□□□ 0.35
LIMS4-203ENST00000632758 CMTR1Q8N1G2 835 aaKnown RBP17.24■□□□□ 0.35
LIMS4-203ENST00000632758 STAG2Q8N3U4 1231 aa17.24■□□□□ 0.35
LIMS4-203ENST00000632758 ZNF280CQ8ND82 737 aa17.24■□□□□ 0.35
LIMS4-203ENST00000632758 IPO9Q96P70 1041 aaKnown RBP17.24■□□□□ 0.35
LIMS4-203ENST00000632758 AFG3L2Q9Y4W6 797 aa17.24■□□□□ 0.35
LIMS4-203ENST00000632758 USP17L10C9JJH3 530 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 CTDNEP1O95476 244 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 NDUFB10O96000 172 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 CALM1P0DP23 149 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 CALM2P0DP24 149 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 CALM3P0DP25 149 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 SNHG28P0DPA3 235 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 RCAN1P53805 252 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 GRM4Q14833 912 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 SPICE1Q8N0Z3 855 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 GMCL1P1Q8NEA9 526 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 SLC10A4Q96EP9 437 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
LIMS4-203ENST00000632758 FEZ1Q99689 392 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 VCPKMTQ9H867 229 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 AS3MTQ9HBK9 375 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 MAD2L2Q9UI95 211 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 FRMPD2Q68DX3 1309 aaPredicted RBP17.23■□□□□ 0.35
LIMS4-203ENST00000632758 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 PLEKHA8P1O95397 391 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 MTMR2Q13614 643 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 ERO1BQ86YB8 467 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 CCDC82Q8N4S0 544 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
LIMS4-203ENST00000632758 OTUD5Q96G74 571 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 KIAA1683Q9H0B3 1180 aa17.23■□□□□ 0.35
LIMS4-203ENST00000632758 NID2Q14112 1375 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 PALM3A6NDB9 673 aaPredicted RBP17.22■□□□□ 0.35
LIMS4-203ENST00000632758 IRF6O14896 467 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 PARP1P09874 1014 aaKnown RBP17.22■□□□□ 0.35
LIMS4-203ENST00000632758 GJA5P36382 358 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 BACE1P56817 501 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 PPATQ06203 517 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 NTRK3Q16288 839 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 KCTD1Q719H9 257 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 NBPF11Q86T75 865 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 OPTNQ96CV9 577 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 MAP3K14Q99558 947 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 CPVLQ9H3G5 476 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 SH2D4AQ9H788 454 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 GOPCQ9HD26 462 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 GPCPD1Q9NPB8 672 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 EMILIN3Q9NT22 766 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 SYNPO2Q9UMS6 1093 aa17.22■□□□□ 0.35
LIMS4-203ENST00000632758 DOCK1Q14185 1865 aa17.21■□□□□ 0.35
LIMS4-203ENST00000632758 PAPPA2Q9BXP8 1791 aa17.21■□□□□ 0.35
LIMS4-203ENST00000632758 JAK2O60674 1132 aa17.21■□□□□ 0.35
LIMS4-203ENST00000632758 HUNKP57058 714 aa17.21■□□□□ 0.35
LIMS4-203ENST00000632758 ZNF543Q08ER8 600 aa17.21■□□□□ 0.35
LIMS4-203ENST00000632758 SLC35G1Q2M3R5 365 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms