RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CUL7Q14999 1698 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 PTPRTO14522 1441 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 SERTM1A2A2V5 107 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 FAM221AA4D161 298 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 FOXN3O00409 490 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-213ENST00000630925 ZBTB39O15060 712 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 GPR39O43194 453 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 TLR5O60602 858 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 HSPA1LP34931 641 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 SSRP1Q08945 709 aaKnown RBP5.66□□□□□ -1.5
SDCBP-213ENST00000630925 GPR158Q5T848 1215 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 PI16Q6UXB8 463 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 FASTKD5Q7L8L6 764 aaKnown RBP5.66□□□□□ -1.5
SDCBP-213ENST00000630925 ATCAYQ86WG3 371 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 NGEFQ8N5V2 710 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 RSRC1Q96IZ7 334 aaKnown RBP5.66□□□□□ -1.5
SDCBP-213ENST00000630925 RSRP1Q9BUV0 290 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 NAA15Q9BXJ9 866 aaKnown RBP5.66□□□□□ -1.5
SDCBP-213ENST00000630925 TMEM134Q9H6X4 195 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 LUC7LQ9NQ29 371 aaKnown RBP5.66□□□□□ -1.5
SDCBP-213ENST00000630925 DIAPH3Q9NSV4 1193 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 RBM28Q9NW13 759 aaKnown RBP5.66□□□□□ -1.5
SDCBP-213ENST00000630925 STIM2Q9P246 746 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 PDP2Q9P2J9 529 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 RABL2AQ9UBK7 228 aaPredicted RBP5.66□□□□□ -1.5
SDCBP-213ENST00000630925 ABCA10Q8WWZ4 1543 aa5.66□□□□□ -1.5
SDCBP-213ENST00000630925 hCG_1642624A0A1W2PR95 340 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 BBOX1O75936 387 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 KRT20P35900 424 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 EIF4A3P38919 411 aaKnown RBP5.65□□□□□ -1.5
SDCBP-213ENST00000630925 MRE11P49959 708 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 GABREP78334 506 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 PLIN5Q00G26 463 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 CACNB2Q08289 660 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-213ENST00000630925 TRIM14Q14142 442 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 FAM26DQ5JW98 314 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 RNF219Q5W0B1 726 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-213ENST00000630925 BRICD5Q6PL45 260 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 CCDC81Q6ZN84 652 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 EPM2AIP1Q7L775 607 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-213ENST00000630925 SLC41A1Q8IVJ1 513 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 TNIP3Q96KP6 325 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 NT5C1AQ9BXI3 368 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 SUDS3Q9H7L9 328 aaPredicted RBP5.65□□□□□ -1.5
SDCBP-213ENST00000630925 ANLNQ9NQW6 1124 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 RRN3Q9NYV6 651 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 ACTR10Q9NZ32 417 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 CEP72Q9P209 647 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 GTF3C4Q9UKN8 822 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 DOLKQ9UPQ8 538 aa5.65□□□□□ -1.5
SDCBP-213ENST00000630925 FAM83GA6ND36 823 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 PHF20L1A8MW92 1017 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 EYA2O00167 538 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 CCDC175P0C221 793 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 USP17L7P0C7H9 530 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 HSD3B1P14060 373 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 RPS6KB1P23443 525 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 MAN2A2P49641 1150 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 FXNQ16595 210 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 C8orf34Q49A92 452 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 TTC31Q49AM3 519 aaPredicted RBP5.65□□□□□ -1.51
SDCBP-213ENST00000630925 OXLD1Q5BKU9 147 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 C6orf132Q5T0Z8 1188 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 TAF3Q5VWG9 929 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 TAB3Q8N5C8 712 aaPredicted RBP5.65□□□□□ -1.51
SDCBP-213ENST00000630925 ZNF296Q8WUU4 475 aaPredicted RBP5.65□□□□□ -1.51
SDCBP-213ENST00000630925 GCC1Q96CN9 775 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 ISCA1Q9BUE6 129 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 MAN1C1Q9NR34 630 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 KCNQ5Q9NR82 932 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 NKIRAS2Q9NYR9 191 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 ZBTB21Q9ULJ3 1066 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 SPEF1Q9Y4P9 236 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 FHAD1B1AJZ9 1412 aa5.65□□□□□ -1.51
SDCBP-213ENST00000630925 MAGI3Q5TCQ9 1506 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 DNAJC25-GNG10A0A024R161 153 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 F6X3S4 739 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 M0R3H8 397 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 DDX3YO15523 660 aaKnown RBP5.64□□□□□ -1.51
SDCBP-213ENST00000630925 MAP3K6O95382 1288 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 COL9A1P20849 921 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 PAX7P23759 505 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 IL4RP24394 825 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 HPDP32754 393 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-213ENST00000630925 AK2P54819 239 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 G3BP1Q13283 466 aaKnown RBP eCLIP5.64□□□□□ -1.51
SDCBP-213ENST00000630925 IFFO2Q5TF58 517 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 RETSATQ6NUM9 610 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 LILRB1Q8NHL6 650 aaPredicted RBP5.64□□□□□ -1.51
SDCBP-213ENST00000630925 PTCD2Q8WV60 388 aaKnown RBP5.64□□□□□ -1.51
SDCBP-213ENST00000630925 TTC17Q96AE7 1141 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 CDCA7LQ96GN5 454 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 ESYT1Q9BSJ8 1104 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 MKS1Q9NXB0 559 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 FAM8A1Q9UBU6 413 aa5.64□□□□□ -1.51
SDCBP-213ENST00000630925 FRMPD2Q68DX3 1309 aaPredicted RBP5.63□□□□□ -1.51
SDCBP-213ENST00000630925 UBAP1LF5GYI3 381 aa5.63□□□□□ -1.51
SDCBP-213ENST00000630925 AREL1O15033 823 aa5.63□□□□□ -1.51
SDCBP-213ENST00000630925 NCAM2O15394 837 aa5.63□□□□□ -1.51
SDCBP-213ENST00000630925 TIPRLO75663 272 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms