RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 PUS7LQ9H0K6 701 aaKnown RBP10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 RPAP3Q9H6T3 665 aaPredicted RBP10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 PCDH10Q9P2E7 1040 aa10.86□□□□□ -0.67
SPTAN1-219ENST00000629378 RPTORQ8N122 1335 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L12C9JPN9 530 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 USP17L21D6R901 530 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 SEC24BO95487 1268 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 MAPK4P31152 587 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 MNX1P50219 401 aaPredicted RBP10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 FXR1P51114 621 aaKnown RBP eCLIP10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 USP14P54578 494 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 CACNB2Q08289 660 aaPredicted RBP10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 MORN1Q5T089 497 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 PLEKHH3Q7Z736 793 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 CCAR1Q8IX12 1150 aaKnown RBP10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 STK11IPQ8N1F8 1099 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 HTATIP2Q9BUP3 242 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 HMX1Q9NP08 348 aaPredicted RBP10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 FLRT1Q9NZU1 646 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 SLC4A4Q9Y6R1 1079 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 RLFQ13129 1914 aa10.85□□□□□ -0.67
SPTAN1-219ENST00000629378 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 CDC45O75419 566 aa10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 PRKAR2AP13861 404 aaKnown RBP10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 SDSP20132 328 aa10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 CCND3P30281 292 aaPredicted RBP10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 CDK8P49336 464 aa10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 C12orf60Q5U649 245 aa10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 WDR78Q5VTH9 848 aa10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 CTR9Q6PD62 1173 aa10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 RABGAP1Q9Y3P9 1069 aa10.84□□□□□ -0.67
SPTAN1-219ENST00000629378 EVI5O60447 810 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 XRCC5P13010 732 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 UBE3CQ15386 1083 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 MAP3K21Q5TCX8 1036 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 SAMD1Q6SPF0 538 aaPredicted RBP10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 SPICE1Q8N0Z3 855 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 NPLOC4Q8TAT6 608 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 GPATCH3Q96I76 525 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 TANGO6Q9C0B7 1094 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 CWC22Q9HCG8 908 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 ATP8A2Q9NTI2 1148 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 ECHDC1Q9NTX5 307 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 ZNFX1Q9P2E3 1918 aaKnown RBP10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 CEP290O15078 2479 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 TTC41PQ6P2S7 1318 aa10.83□□□□□ -0.68
SPTAN1-219ENST00000629378 COL11A1P12107 1806 aaPredicted RBP10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 ERC2O15083 957 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 ZKSCAN1P17029 563 aaPredicted RBP10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 PTPREP23469 700 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 RGS2P41220 211 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 ATP2B2Q01814 1243 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 COG2Q14746 738 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 TMEM179Q6ZVK1 233 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 NECAB2Q7Z6G3 386 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 GTF3C2Q8WUA4 911 aaPredicted RBP10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 SOCS4Q8WXH5 440 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 OSBP2Q969R2 916 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 STRBPQ96SI9 672 aaKnown RBP10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 UPF2Q9HAU5 1272 aaKnown RBP10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 SWAP70Q9UH65 585 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 OGDHLQ9ULD0 1010 aa10.82□□□□□ -0.68
SPTAN1-219ENST00000629378 PARP14Q460N5 1801 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 GSG1L2A8MUP6 293 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 TRIM6-TRIM34B2RNG4 842 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 GLRX3O76003 335 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 EEF2P13639 858 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 ANP32AP39687 249 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 CCNA1P78396 465 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 LHX8Q68G74 356 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 LBX2Q6XYB7 198 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 C16orf86Q6ZW13 317 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 C7orf61Q8IZ16 206 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 PI4K2BQ8TCG2 481 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 RILPL2Q969X0 211 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 MOV10L1Q9BXT6 1211 aaKnown RBP10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 PRO3102Q9H379 93 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 HOXC10Q9NYD6 342 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 NR2E3Q9Y5X4 410 aa10.81□□□□□ -0.68
SPTAN1-219ENST00000629378 DNAH12Q6ZR08 3092 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 FRMPD3Q5JV73 1810 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 SLC15A5A6NIM6 579 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 MINDY4BA8MYZ0 360 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 M0R2C6 588 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 SYN1P17600 705 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 DSG3P32926 999 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 CYP2C19P33261 490 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 MFAP1P55081 439 aaKnown RBP10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 ICA1Q05084 483 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 GRB14Q14449 540 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 PLS1Q14651 629 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 ZSCAN25Q6NSZ9 544 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 CASC1Q6TDU7 716 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 KBTBD3Q8NAB2 608 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 ANKLE1Q8NAG6 615 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 TRPV1Q8NER1 839 aa10.8□□□□□ -0.68
SPTAN1-219ENST00000629378 ATG4CQ96DT6 458 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms