RNA–Protein interactions for RNA: ENST00000629350.2

CDK7-215, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-215ENST00000629350 FAM110CQ1W6H9 321 aa17.24■□□□□ 0.35
CDK7-215ENST00000629350 ABCB5Q2M3G0 1257 aa17.24■□□□□ 0.35
CDK7-215ENST00000629350 OSBP2Q969R2 916 aa17.24■□□□□ 0.35
CDK7-215ENST00000629350 FRMPD3Q5JV73 1810 aa17.24■□□□□ 0.35
CDK7-215ENST00000629350 DNAH12Q6ZR08 3092 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 USP17L10C9JJH3 530 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 M0R2C6 588 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 CNMDO75829 334 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 AKR1B1P15121 316 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 GRK4P32298 578 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 HERVK_113P62684 666 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 UBE3CQ15386 1083 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 CERKLQ49MI3 558 aaPredicted RBP17.23■□□□□ 0.35
CDK7-215ENST00000629350 TMED8Q6PL24 325 aaPredicted RBP17.23■□□□□ 0.35
CDK7-215ENST00000629350 TTC6Q86TZ1 520 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 CERS3Q8IU89 383 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 SIAH1Q8IUQ4 282 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 PTCD2Q8WV60 388 aaKnown RBP17.23■□□□□ 0.35
CDK7-215ENST00000629350 TBC1D2Q9BYX2 928 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 EPB41L4AQ9HCS5 686 aaPredicted RBP17.23■□□□□ 0.35
CDK7-215ENST00000629350 MORF4L1Q9UBU8 362 aa17.23■□□□□ 0.35
CDK7-215ENST00000629350 TNPO2O14787 897 aaKnown RBP17.22■□□□□ 0.35
CDK7-215ENST00000629350 GNRH1P01148 92 aa17.22■□□□□ 0.35
CDK7-215ENST00000629350 VCAM1P19320 739 aa17.22■□□□□ 0.35
CDK7-215ENST00000629350 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
CDK7-215ENST00000629350 TRIM32Q13049 653 aa17.22■□□□□ 0.35
CDK7-215ENST00000629350 KBTBD3Q8NAB2 608 aa17.22■□□□□ 0.35
CDK7-215ENST00000629350 RAET1EQ8TD07 263 aa17.22■□□□□ 0.35
CDK7-215ENST00000629350 SEC62Q99442 399 aaKnown RBP17.22■□□□□ 0.35
CDK7-215ENST00000629350 UNC93B1Q9H1C4 597 aa17.22■□□□□ 0.35
CDK7-215ENST00000629350 PORCNQ9H237 461 aa17.22■□□□□ 0.35
CDK7-215ENST00000629350 RBPJLQ9UBG7 517 aa17.22■□□□□ 0.35
CDK7-215ENST00000629350 PNMA3Q9UL41 463 aa17.22■□□□□ 0.35
CDK7-215ENST00000629350 MYH4Q9Y623 1939 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 USP17L12C9JPN9 530 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 USP17L21D6R901 530 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 SNPHO15079 494 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 CCL5P13501 91 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 PRMT2P55345 433 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 ARHGEF6Q15052 776 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 Q3C1V9 767 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 C12orf60Q5U649 245 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.21■□□□□ 0.35
CDK7-215ENST00000629350 TMOD4Q9NZQ9 345 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 PCDHGA4Q9Y5G9 962 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
CDK7-215ENST00000629350 FOXP2O15409 715 aa17.2■□□□□ 0.34
CDK7-215ENST00000629350 ADCY3O60266 1144 aa17.2■□□□□ 0.34
CDK7-215ENST00000629350 INHAP05111 366 aa17.2■□□□□ 0.34
CDK7-215ENST00000629350 IRX3P78415 501 aaPredicted RBP17.2■□□□□ 0.34
CDK7-215ENST00000629350 CTR9Q6PD62 1173 aa17.2■□□□□ 0.34
CDK7-215ENST00000629350 USP17L2Q6R6M4 530 aa17.2■□□□□ 0.34
CDK7-215ENST00000629350 KHSRPQ92945 711 aaKnown RBP eCLIP17.2■□□□□ 0.341e-7■□□□□ 11.1
CDK7-215ENST00000629350 STRBPQ96SI9 672 aaKnown RBP17.2■□□□□ 0.34
CDK7-215ENST00000629350 FEZ1Q99689 392 aa17.2■□□□□ 0.34
CDK7-215ENST00000629350 KIAA1683Q9H0B3 1180 aa17.2■□□□□ 0.34
CDK7-215ENST00000629350 GINM1Q9NU53 330 aa17.2■□□□□ 0.34
CDK7-215ENST00000629350 GJD2Q9UKL4 321 aa17.2■□□□□ 0.34
CDK7-215ENST00000629350 GSG1L2A8MUP6 293 aa17.19■□□□□ 0.34
CDK7-215ENST00000629350 C19orf81C9J6K1 198 aa17.19■□□□□ 0.34
CDK7-215ENST00000629350 MPHOSPH10O00566 681 aaKnown RBP17.19■□□□□ 0.34
CDK7-215ENST00000629350 GCLCP48506 637 aaPredicted RBP17.19■□□□□ 0.34
CDK7-215ENST00000629350 STK11IPQ8N1F8 1099 aa17.19■□□□□ 0.34
CDK7-215ENST00000629350 ZNF710Q8N1W2 664 aa17.19■□□□□ 0.34
CDK7-215ENST00000629350 PAGR1Q9BTK6 254 aa17.19■□□□□ 0.34
CDK7-215ENST00000629350 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.19■□□□□ 0.34
CDK7-215ENST00000629350 CDK8P49336 464 aa17.18■□□□□ 0.34
CDK7-215ENST00000629350 ARSIQ5FYB1 569 aa17.18■□□□□ 0.34
CDK7-215ENST00000629350 C16orf86Q6ZW13 317 aa17.18■□□□□ 0.34
CDK7-215ENST00000629350 NBPF11Q86T75 865 aa17.18■□□□□ 0.34
CDK7-215ENST00000629350 RPAP3Q9H6T3 665 aaPredicted RBP17.18■□□□□ 0.34
CDK7-215ENST00000629350 ATP8A2Q9NTI2 1148 aa17.18■□□□□ 0.34
CDK7-215ENST00000629350 BTBD7Q9P203 1132 aa17.18■□□□□ 0.34
CDK7-215ENST00000629350 ARIH1Q9Y4X5 557 aaPredicted RBP17.18■□□□□ 0.34
CDK7-215ENST00000629350 ROBO3Q96MS0 1386 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 ZNF236Q9UL36 1845 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 SPDYE16A6NNV3 312 aaPredicted RBP17.17■□□□□ 0.34
CDK7-215ENST00000629350 RNF113AO15541 343 aaKnown RBP17.17■□□□□ 0.34
CDK7-215ENST00000629350 GPAA1O43292 621 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 HOXD10P28358 340 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 ERVK-9P63128 1117 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 ERVK-24P63145 666 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 PABPC4Q13310 644 aaKnown RBP eCLIP17.17■□□□□ 0.34
CDK7-215ENST00000629350 IRF5Q13568 498 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 EXOC6Q8TAG9 804 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 TRIB2Q92519 343 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 APPBP2Q92624 585 aa17.17■□□□□ 0.34
CDK7-215ENST00000629350 MX1P20591 662 aa17.16■□□□□ 0.34
CDK7-215ENST00000629350 PRPF38BQ5VTL8 546 aaKnown RBP17.16■□□□□ 0.34
CDK7-215ENST00000629350 CATSPERGQ6ZRH7 1159 aa17.16■□□□□ 0.34
CDK7-215ENST00000629350 CCDC129Q6ZRS4 1044 aa17.16■□□□□ 0.34
CDK7-215ENST00000629350 UBE2Q1Q7Z7E8 422 aa17.16■□□□□ 0.34
CDK7-215ENST00000629350 TTC41PQ6P2S7 1318 aa17.16■□□□□ 0.34
CDK7-215ENST00000629350 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
CDK7-215ENST00000629350 CCL14Q16627 93 aa17.15■□□□□ 0.34
CDK7-215ENST00000629350 SPICE1Q8N0Z3 855 aa17.15■□□□□ 0.34
CDK7-215ENST00000629350 RNF208Q9H0X6 261 aa17.15■□□□□ 0.34
CDK7-215ENST00000629350 BIN2Q9UBW5 565 aaPredicted RBP17.15■□□□□ 0.34
CDK7-215ENST00000629350 TRIOBPQ9H2D6 2365 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms