RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 NEDD4P46934 1319 aa16.09■□□□□ 0.17
SOX2-OT-248ENST00000628496 USP17L15C9J2P7 530 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 USP17L13C9JLJ4 530 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 USP17L11C9JVI0 530 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 USP17L18D6R9N7 530 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 USP17L22D6RA61 530 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 USP17L17D6RBQ6 530 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 USP17L19D6RCP7 530 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 USP17L20D6RJB6 530 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 RANBP6O60518 1105 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 NMT2O60551 498 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 LACTBP83111 547 aaPredicted RBP16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 USP17L24Q0WX57 530 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 CATSPERGQ6ZRH7 1159 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 TNS4Q8IZW8 715 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 ANKRD13CQ8N6S4 541 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 LPAR1Q92633 364 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 MCOLN1Q9GZU1 580 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 TOMM22Q9NS69 142 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 CLIP2Q9UDT6 1046 aa16.08■□□□□ 0.16
SOX2-OT-248ENST00000628496 PEX10O60683 326 aa16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 CDC45O75419 566 aa16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 TTLL1O95922 423 aa16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 PCP11498 1178 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 CTGFP29279 349 aa16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 HERVK_113P62684 666 aa16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 POTEEQ6S8J3 1075 aa16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 OTOP1Q7RTM1 612 aa16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 MKL1Q969V6 931 aa16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 LSG1Q9H089 658 aaKnown RBP16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 MYH8P13535 1937 aa16.07■□□□□ 0.16
SOX2-OT-248ENST00000628496 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 GCLCP48506 637 aaPredicted RBP16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 FAM110CQ1W6H9 321 aa16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 LRRC47Q8N1G4 583 aaKnown RBP16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 TANGO6Q9C0B7 1094 aa16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 GOPCQ9HD26 462 aa16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 TXNRD2Q9NNW7 524 aa16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 TRIM17Q9Y577 477 aa16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 TAF6LQ9Y6J9 622 aa16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
SOX2-OT-248ENST00000628496 SPDYE16A6NNV3 312 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 F5H6K3 240 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 WDR46O15213 610 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 NDUFB10O96000 172 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 CYP21A2P08686 494 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 NOVP48745 357 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 KLRC3Q07444 240 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 TRIM47Q96LD4 638 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 EFCC1Q9HA90 598 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 MORF4L1Q9UBU8 362 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 SYNPO2Q9UMS6 1093 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 STX8Q9UNK0 236 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 RBM8AQ9Y5S9 174 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 LAMA4Q16363 1823 aa16.05■□□□□ 0.16
SOX2-OT-248ENST00000628496 RAD21O60216 631 aa16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 CNMDO75829 334 aa16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 PSMC4P43686 418 aa16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 KIF22Q14807 665 aa16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 FAM83BQ5T0W9 1011 aa16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 GMCL1P1Q8NEA9 526 aa16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 ESR2Q92731 530 aa16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 NUP88Q99567 741 aaPredicted RBP16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 TCP11L1Q9NUJ3 509 aa16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 RBPJLQ9UBG7 517 aa16.04■□□□□ 0.16
SOX2-OT-248ENST00000628496 B4E1Z4 1266 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 KDM4AO75164 1064 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 COG2Q14746 738 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 CASC1Q6TDU7 716 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 LBX2Q6XYB7 198 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 GTF3C2Q8WUA4 911 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 PAGR1Q9BTK6 254 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 ANO2Q9NQ90 1003 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 FBXO28Q9NVF7 368 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 ZSWIM8A7E2V4 1837 aa16.03■□□□□ 0.16
SOX2-OT-248ENST00000628496 FLOT1O75955 427 aa16.02■□□□□ 0.16
SOX2-OT-248ENST00000628496 PKN2Q16513 984 aaKnown RBP16.02■□□□□ 0.16
SOX2-OT-248ENST00000628496 Q3C1V9 767 aa16.02■□□□□ 0.16
SOX2-OT-248ENST00000628496 RCSD1Q6JBY9 416 aa16.02■□□□□ 0.16
SOX2-OT-248ENST00000628496 STOX1Q6ZVD7 989 aa16.02■□□□□ 0.16
SOX2-OT-248ENST00000628496 ZKSCAN3Q9BRR0 538 aa16.02■□□□□ 0.16
SOX2-OT-248ENST00000628496 BTBD7Q9P203 1132 aa16.02■□□□□ 0.16
SOX2-OT-248ENST00000628496 FMNL1O95466 1100 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 DSG3P32926 999 aa16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 NT5C2P49902 561 aa16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 FCGRTP55899 365 aa16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 ERVK-9P63128 1117 aa16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 ERVK-24P63145 666 aa16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 ARHGEF6Q15052 776 aa16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 SLFN13Q68D06 897 aa16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 FBXO46Q6PJ61 603 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 RASGRP2Q7LDG7 609 aa16.01■□□□□ 0.15
SOX2-OT-248ENST00000628496 GPRC5AQ8NFJ5 357 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms