RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 USP33Q8TEY7 942 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 ZNF473Q8WTR7 871 aaKnown RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 CCDC12Q8WUD4 166 aaPredicted RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 DYDC1Q8WWB3 177 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 SPIRE2Q8WWL2 714 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 GIMAP1Q8WWP7 306 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 SREK1Q8WXA9 508 aaKnown RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 KIFAP3Q92845 792 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 DHX58Q96C10 678 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 RUNDC1Q96C34 613 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 HVCN1Q96D96 273 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 RBM33Q96EV2 1170 aaKnown RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 STAMBPL1Q96FJ0 436 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 IFT43Q96FT9 208 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 DDX27Q96GQ7 796 aaKnown RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 L3MBTL3Q96JM7 780 aaPredicted RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 RPGRIP1Q96KN7 1286 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 FGD4Q96M96 766 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 TTC14Q96N46 770 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 ZMAT2Q96NC0 199 aaKnown RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 WDR24Q96S15 920 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 TESK2Q96S53 571 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 CCDC28BQ9BUN5 200 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 NUP58Q9BVL2 599 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 BCL2L13Q9BXK5 485 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 FAM192AQ9GZU8 254 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 SCAND2PQ9GZW5 306 aaPredicted RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 EPN3Q9H201 632 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 EPC1Q9H2F5 836 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 VCXQ9H320 206 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 JADE2Q9NQC1 790 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 TBCCD1Q9NVR7 557 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.14□□□□□ -2.07
TCF4-264ENST00000628391 RMND1Q9NWS8 449 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 NLRP2Q9NX02 1062 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 GALNT8Q9NY28 637 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 SLC5A4Q9NY91 659 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 DACT1Q9NYF0 836 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 UBAP1Q9NZ09 502 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 SUCLA2Q9P2R7 463 aaPredicted RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 TFIP11Q9UBB9 837 aaKnown RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 MAGEC2Q9UBF1 373 aaPredicted RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 DKK3Q9UBP4 350 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 CDC23Q9UJX2 597 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 MTMR7Q9Y216 660 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 PPP2R2CQ9Y2T4 447 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 SH3GLB1Q9Y371 365 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 C2CD2Q9Y426 696 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 TTLL3Q9Y4R7 772 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 SAMM50Q9Y512 469 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 USP16Q9Y5T5 823 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 PTPRTO14522 1441 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 ZFYVE9O95405 1425 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 RIMS2Q9UQ26 1411 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 ABCC4O15439 1325 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 ARHGEF28Q8N1W1 1705 aaKnown RBP2.14□□□□□ -2.07
TCF4-264ENST00000628391 NEO1Q92859 1461 aa2.14□□□□□ -2.07
TCF4-264ENST00000628391 ADCY9O60503 1353 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 ABCC12Q96J65 1359 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 LRRC7Q96NW7 1537 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 SYCP2Q9BX26 1530 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 A0A1B0GVL5 298 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 BICDL2A1A5D9 508 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 SPDYE5A6NIY4 337 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 TMEM110-MUSTN1A8MSY1 372 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 EIF3FO00303 357 aaPredicted RBP2.13□□□□□ -2.07
TCF4-264ENST00000628391 WNT7AO00755 349 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 OPLAHO14841 1288 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 LSM1O15116 133 aaKnown RBP2.13□□□□□ -2.07
TCF4-264ENST00000628391 TTI1O43156 1089 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 STX10O60499 249 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 MGEA5O60502 916 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 USO1O60763 962 aaKnown RBP2.13□□□□□ -2.07
TCF4-264ENST00000628391 PFKFB2O60825 505 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 PFDN1O60925 122 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 GIGYF1O75420 1035 aaPredicted RBP2.13□□□□□ -2.07
TCF4-264ENST00000628391 PPP1R37O75864 691 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 ZNF202O95125 648 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 SSBP05455 408 aaKnown RBP eCLIP2.13□□□□□ -2.07
TCF4-264ENST00000628391 RHOXF2BP0C7M4 288 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 ACADSP16219 412 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 ATP2A2P16615 1042 aaKnown RBP2.13□□□□□ -2.07
TCF4-264ENST00000628391 SDSP20132 328 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 PDCP20941 246 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 SP100P23497 879 aaPredicted RBP2.13□□□□□ -2.07
TCF4-264ENST00000628391 CA8P35219 290 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 KRT9P35527 623 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 PDE6BP35913 854 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 GGCXP38435 758 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 SCTRP47872 440 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 SERPINB8P50452 374 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 USP11P51784 963 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 GUCY2FP51841 1108 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 USP14P54578 494 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 EPHB4P54760 987 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 MTTPP55157 894 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 TUBA4AP68366 448 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 GPSM2P81274 684 aa2.13□□□□□ -2.07
TCF4-264ENST00000628391 MRPS25P82663 173 aaKnown RBP2.13□□□□□ -2.07
TCF4-264ENST00000628391 PDE1BQ01064 536 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms