RNA–Protein interactions for RNA: ENST00000628084.2

CDC16-211, Transcript of cell division cycle 16, humanhuman

TSL 5 BASIC

Gene CDC16, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-211ENST00000628084 MYO3BQ8WXR4 1341 aa28.24■■■□□ 2.11
CDC16-211ENST00000628084 A0A1B0GVL5 298 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 RBM43Q6ZSC3 357 aaKnown RBP28.23■■■□□ 2.11
CDC16-211ENST00000628084 ZFPM1Q8IX07 1006 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 LZTS2Q9BRK4 669 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 EHD4Q9H223 541 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 CABP5Q9NP86 173 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 MTMR4Q9NYA4 1195 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 BAZ2BQ9UIF8 2168 aaKnown RBP28.23■■■□□ 2.11
CDC16-211ENST00000628084 PALM3A6NDB9 673 aaPredicted RBP28.23■■■□□ 2.11
CDC16-211ENST00000628084 AKR1B1P15121 316 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 NOVP48745 357 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 TOB1P50616 345 aaPredicted RBP28.23■■■□□ 2.11
CDC16-211ENST00000628084 MTFR1LQ9H019 292 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 VPS33BQ9H267 617 aa28.23■■■□□ 2.11
CDC16-211ENST00000628084 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.23■■■□□ 2.11
CDC16-211ENST00000628084 AXDND1Q5T1B0 1012 aaPredicted RBP28.22■■■□□ 2.11
CDC16-211ENST00000628084 ZSCAN29Q8IWY8 852 aaPredicted RBP28.22■■■□□ 2.11
CDC16-211ENST00000628084 CTAGE5O15320 804 aa28.22■■■□□ 2.11
CDC16-211ENST00000628084 RAD17O75943 681 aa28.22■■■□□ 2.11
CDC16-211ENST00000628084 PARP1P09874 1014 aaKnown RBP28.22■■■□□ 2.11
CDC16-211ENST00000628084 SHMT1P34896 483 aa28.22■■■□□ 2.11
CDC16-211ENST00000628084 CFAP100Q494V2 611 aa28.22■■■□□ 2.11
CDC16-211ENST00000628084 FAM198AQ9UFP1 575 aa28.22■■■□□ 2.11
CDC16-211ENST00000628084 KLRF2D3W0D1 207 aa28.21■■■□□ 2.11
CDC16-211ENST00000628084 CMA1P23946 247 aa28.21■■■□□ 2.11
CDC16-211ENST00000628084 NDUFA8P51970 172 aa28.21■■■□□ 2.11
CDC16-211ENST00000628084 NLRP5P59047 1200 aa28.21■■■□□ 2.11
CDC16-211ENST00000628084 CCDC173Q0VFZ6 552 aa28.21■■■□□ 2.11
CDC16-211ENST00000628084 RSBN1LQ6PCB5 846 aaPredicted RBP28.21■■■□□ 2.11
CDC16-211ENST00000628084 FMR1NBQ8N0W7 255 aaPredicted RBP28.21■■■□□ 2.11
CDC16-211ENST00000628084 NPM3O75607 178 aaKnown RBP28.2■■■□□ 2.11
CDC16-211ENST00000628084 GOLGA8HP0CJ92 632 aa28.2■■■□□ 2.11
CDC16-211ENST00000628084 TDRD3Q9H7E2 651 aaKnown RBP28.2■■■□□ 2.11
CDC16-211ENST00000628084 PI4KBQ9UBF8 816 aa28.2■■■□□ 2.11
CDC16-211ENST00000628084 TYRO3Q06418 890 aa28.19■■■□□ 2.1
CDC16-211ENST00000628084 SASS6Q6UVJ0 657 aa28.19■■■□□ 2.1
CDC16-211ENST00000628084 SH3GLB2Q9NR46 395 aa28.19■■■□□ 2.1
CDC16-211ENST00000628084 CEP131Q9UPN4 1083 aa28.19■■■□□ 2.1
CDC16-211ENST00000628084 PSME4Q14997 1843 aa28.19■■■□□ 2.1
CDC16-211ENST00000628084 PSMD14O00487 310 aa28.19■■■□□ 2.1
CDC16-211ENST00000628084 MPHOSPH10O00566 681 aaKnown RBP28.19■■■□□ 2.1
CDC16-211ENST00000628084 VIL1P09327 827 aaKnown RBP28.19■■■□□ 2.1
CDC16-211ENST00000628084 PPP1R1BQ9UD71 204 aaPredicted RBP28.19■■■□□ 2.1
CDC16-211ENST00000628084 IGKV6D-41A0A0C4DH26 115 aa28.18■■■□□ 2.1
CDC16-211ENST00000628084 DDTLA6NHG4 134 aaPredicted RBP28.18■■■□□ 2.1
CDC16-211ENST00000628084 CYTH3O43739 400 aa28.18■■■□□ 2.1
CDC16-211ENST00000628084 TTLL1O95922 423 aa28.18■■■□□ 2.1
CDC16-211ENST00000628084 VEGFAP15692 232 aaPredicted RBP28.18■■■□□ 2.1
CDC16-211ENST00000628084 ATP2B1P20020 1258 aa28.18■■■□□ 2.1
CDC16-211ENST00000628084 NPY5RQ15761 445 aa28.18■■■□□ 2.1
CDC16-211ENST00000628084 DALRD3Q5D0E6 543 aaKnown RBP28.18■■■□□ 2.1
CDC16-211ENST00000628084 USP17L2Q6R6M4 530 aa28.18■■■□□ 2.1
CDC16-211ENST00000628084 PRMT6Q96LA8 375 aaPredicted RBP28.18■■■□□ 2.1
CDC16-211ENST00000628084 TRIM34Q9BYJ4 488 aa28.18■■■□□ 2.1
CDC16-211ENST00000628084 PCDHB6Q9Y5E3 794 aa28.18■■■□□ 2.1
CDC16-211ENST00000628084 CALML3P27482 149 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 EIF6P56537 245 aaKnown RBP28.17■■■□□ 2.1
CDC16-211ENST00000628084 NIM1KQ8IY84 436 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 OGFOD1Q8N543 542 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 CCDC17Q96LX7 622 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 RTN4Q9NQC3 1192 aaKnown RBP28.17■■■□□ 2.1
CDC16-211ENST00000628084 CLIP2Q9UDT6 1046 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 HDAC9Q9UKV0 1011 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 CUTAO60888 179 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 UVSSAQ2YD98 709 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 RASGRP2Q7LDG7 609 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 KRI1Q8N9T8 703 aaKnown RBP28.17■■■□□ 2.1
CDC16-211ENST00000628084 GPKOWQ92917 476 aaPredicted RBP eCLIP28.17■■■□□ 2.19e-6■■□□□ 14.5
CDC16-211ENST00000628084 SDF4Q9BRK5 362 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 SPZ1Q9BXG8 430 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 ZNRF3Q9ULT6 936 aa28.17■■■□□ 2.1
CDC16-211ENST00000628084 NOL7Q9UMY1 257 aaKnown RBP28.16■■■□□ 2.1
CDC16-211ENST00000628084 PFKFB1P16118 471 aa28.15■■■□□ 2.1
CDC16-211ENST00000628084 PPP1R9BQ96SB3 815 aa28.15■■■□□ 2.1
CDC16-211ENST00000628084 USP17L5A8MUK1 530 aa28.15■■■□□ 2.1
CDC16-211ENST00000628084 SLC35G1Q2M3R5 365 aa28.15■■■□□ 2.1
CDC16-211ENST00000628084 EARS2Q5JPH6 523 aaKnown RBP28.15■■■□□ 2.1
CDC16-211ENST00000628084 SH3BP5LQ7L8J4 393 aa28.15■■■□□ 2.1
CDC16-211ENST00000628084 LRRC47Q8N1G4 583 aaKnown RBP28.15■■■□□ 2.1
CDC16-211ENST00000628084 TNFRSF25Q93038 417 aa28.15■■■□□ 2.1
CDC16-211ENST00000628084 MRVI1Q9Y6F6 885 aa28.15■■■□□ 2.1
CDC16-211ENST00000628084 COL4A5P29400 1685 aa28.14■■■□□ 2.1
CDC16-211ENST00000628084 FAM205CA6NFA0 338 aa28.14■■■□□ 2.1
CDC16-211ENST00000628084 TRIM75PA6NK02 468 aa28.14■■■□□ 2.1
CDC16-211ENST00000628084 ENTPD3O75355 529 aa28.14■■■□□ 2.1
CDC16-211ENST00000628084 R3HDM1Q15032 1099 aaKnown RBP28.14■■■□□ 2.1
CDC16-211ENST00000628084 PPP4R3BQ5MIZ7 849 aa28.14■■■□□ 2.1
CDC16-211ENST00000628084 HEATR3Q7Z4Q2 680 aa28.14■■■□□ 2.1
CDC16-211ENST00000628084 FOXP4Q8IVH2 680 aaPredicted RBP28.14■■■□□ 2.1
CDC16-211ENST00000628084 CLIC6Q96NY7 704 aa28.14■■■□□ 2.1
CDC16-211ENST00000628084 DNAJC18Q9H819 358 aa28.14■■■□□ 2.1
CDC16-211ENST00000628084 TMOD2Q9NZR1 351 aa28.14■■■□□ 2.1
CDC16-211ENST00000628084 ZNF202O95125 648 aa28.14■■■□□ 2.09
CDC16-211ENST00000628084 PDHBP11177 359 aa28.14■■■□□ 2.09
CDC16-211ENST00000628084 SMARCA1P28370 1054 aa28.14■■■□□ 2.09
CDC16-211ENST00000628084 SHC4Q6S5L8 630 aa28.14■■■□□ 2.09
CDC16-211ENST00000628084 CLEC10AQ8IUN9 316 aa28.14■■■□□ 2.09
CDC16-211ENST00000628084 GMLQ99445 158 aa28.14■■■□□ 2.09
CDC16-211ENST00000628084 SLURP2P0DP57 97 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms