RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 KIF1BPQ96EK5 621 aa16.34■□□□□ 0.21
TCF4-262ENST00000628078 UBE2OQ9C0C9 1292 aaKnown RBP16.34■□□□□ 0.21
TCF4-262ENST00000628078 DCP1AQ9NPI6 582 aaPredicted RBP16.34■□□□□ 0.21
TCF4-262ENST00000628078 IVNS1ABPQ9Y6Y0 642 aa16.34■□□□□ 0.21
TCF4-262ENST00000628078 BAZ2AQ9UIF9 1905 aaKnown RBP16.33■□□□□ 0.21
TCF4-262ENST00000628078 SLC15A5A6NIM6 579 aa16.33■□□□□ 0.2
TCF4-262ENST00000628078 MBD4O95243 580 aa16.33■□□□□ 0.2
TCF4-262ENST00000628078 COL6A1P12109 1028 aa16.33■□□□□ 0.2
TCF4-262ENST00000628078 AKR1B1P15121 316 aa16.33■□□□□ 0.2
TCF4-262ENST00000628078 PLS1Q14651 629 aa16.33■□□□□ 0.2
TCF4-262ENST00000628078 COG2Q14746 738 aa16.33■□□□□ 0.2
TCF4-262ENST00000628078 DPP9Q86TI2 863 aa16.33■□□□□ 0.2
TCF4-262ENST00000628078 TRPV1Q8NER1 839 aa16.33■□□□□ 0.2
TCF4-262ENST00000628078 MOV10L1Q9BXT6 1211 aaKnown RBP16.33■□□□□ 0.2
TCF4-262ENST00000628078 A0A1W2PPC1 479 aa16.32■□□□□ 0.2
TCF4-262ENST00000628078 SMARCA5O60264 1052 aaPredicted RBP16.32■□□□□ 0.2
TCF4-262ENST00000628078 BMP8BP34820 402 aa16.32■□□□□ 0.2
TCF4-262ENST00000628078 PRAMEF19Q5SWL8 479 aa16.32■□□□□ 0.2
TCF4-262ENST00000628078 RPAP2Q8IXW5 612 aaPredicted RBP16.32■□□□□ 0.2
TCF4-262ENST00000628078 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
TCF4-262ENST00000628078 SLC17A8Q8NDX2 589 aa16.32■□□□□ 0.2
TCF4-262ENST00000628078 PAG1Q9NWQ8 432 aa16.32■□□□□ 0.2
TCF4-262ENST00000628078 FRMPD3Q5JV73 1810 aa16.31■□□□□ 0.2
TCF4-262ENST00000628078 GRB14Q14449 540 aa16.31■□□□□ 0.2
TCF4-262ENST00000628078 GJC2Q5T442 439 aaPredicted RBP16.31■□□□□ 0.2
TCF4-262ENST00000628078 SIAH1Q8IUQ4 282 aa16.31■□□□□ 0.2
TCF4-262ENST00000628078 ZBTB40Q9NUA8 1239 aa16.31■□□□□ 0.2
TCF4-262ENST00000628078 DDX20Q9UHI6 824 aaKnown RBP16.31■□□□□ 0.2
TCF4-262ENST00000628078 MYH8P13535 1937 aa16.31■□□□□ 0.2
TCF4-262ENST00000628078 ZBED9Q6R2W3 1325 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 RAD21O60216 631 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 HMMRO75330 724 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 ERCC3P19447 782 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 ADORA2AP29274 412 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 ADD2P35612 726 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 LBX2Q6XYB7 198 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 NCAPG2Q86XI2 1143 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 DEFB123Q8N688 67 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 ATG4CQ96DT6 458 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 HOXC10Q9NYD6 342 aa16.3■□□□□ 0.2
TCF4-262ENST00000628078 USP17L12C9JPN9 530 aa16.29■□□□□ 0.2
TCF4-262ENST00000628078 USP17L21D6R901 530 aa16.29■□□□□ 0.2
TCF4-262ENST00000628078 COBLO75128 1261 aa16.29■□□□□ 0.2
TCF4-262ENST00000628078 FLOT1O75955 427 aa16.29■□□□□ 0.2
TCF4-262ENST00000628078 TMEM179Q6ZVK1 233 aa16.29■□□□□ 0.2
TCF4-262ENST00000628078 TDHQ8IZJ6 230 aa16.29■□□□□ 0.2
TCF4-262ENST00000628078 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.29■□□□□ 0.2
TCF4-262ENST00000628078 SPATC1LQ9H0A9 340 aa16.29■□□□□ 0.2
TCF4-262ENST00000628078 DDX19BQ9UMR2 479 aa16.29■□□□□ 0.2
TCF4-262ENST00000628078 RLFQ13129 1914 aa16.29■□□□□ 0.2
TCF4-262ENST00000628078 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
TCF4-262ENST00000628078 MS4A1P11836 297 aa16.28■□□□□ 0.2
TCF4-262ENST00000628078 ATP5JP18859 108 aa16.28■□□□□ 0.2
TCF4-262ENST00000628078 DSG3P32926 999 aa16.28■□□□□ 0.2
TCF4-262ENST00000628078 CDK8P49336 464 aa16.28■□□□□ 0.2
TCF4-262ENST00000628078 ICA1Q05084 483 aa16.28■□□□□ 0.2
TCF4-262ENST00000628078 C20orf194Q5TEA3 1177 aa16.28■□□□□ 0.2
TCF4-262ENST00000628078 SLC4A4Q9Y6R1 1079 aa16.28■□□□□ 0.2
TCF4-262ENST00000628078 ZNFX1Q9P2E3 1918 aaKnown RBP16.27■□□□□ 0.2
TCF4-262ENST00000628078 HOXC6P09630 235 aa16.27■□□□□ 0.2
TCF4-262ENST00000628078 EEF2P13639 858 aaKnown RBP16.27■□□□□ 0.2
TCF4-262ENST00000628078 C12orf60Q5U649 245 aa16.27■□□□□ 0.2
TCF4-262ENST00000628078 TMED8Q6PL24 325 aaPredicted RBP16.27■□□□□ 0.2
TCF4-262ENST00000628078 LPAR1Q92633 364 aa16.27■□□□□ 0.2
TCF4-262ENST00000628078 HAUS7Q99871 368 aa16.27■□□□□ 0.2
TCF4-262ENST00000628078 PUS7LQ9H0K6 701 aaKnown RBP16.27■□□□□ 0.2
TCF4-262ENST00000628078 ARHGEF10LQ9HCE6 1279 aa16.27■□□□□ 0.2
TCF4-262ENST00000628078 FBXO28Q9NVF7 368 aa16.27■□□□□ 0.2
TCF4-262ENST00000628078 SWAP70Q9UH65 585 aa16.27■□□□□ 0.2
TCF4-262ENST00000628078 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
TCF4-262ENST00000628078 TMX2Q9Y320 296 aa16.27■□□□□ 0.2
TCF4-262ENST00000628078 CYBAP13498 195 aa16.26■□□□□ 0.19
TCF4-262ENST00000628078 FERMT2Q96AC1 680 aa16.26■□□□□ 0.19
TCF4-262ENST00000628078 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.26■□□□□ 0.196e-7■■■■■ 41.4
TCF4-262ENST00000628078 VCPKMTQ9H867 229 aa16.26■□□□□ 0.19
TCF4-262ENST00000628078 ATP8A2Q9NTI2 1148 aa16.26■□□□□ 0.19
TCF4-262ENST00000628078 COL11A1P12107 1806 aaPredicted RBP16.26■□□□□ 0.19
TCF4-262ENST00000628078 DLL1O00548 723 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 STRNO43815 780 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 PGK2P07205 417 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 SLC4A3P48751 1232 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 RTP1P59025 263 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 TMEM132BQ14DG7 1078 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 LRIT3Q3SXY7 679 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 CTR9Q6PD62 1173 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 FAM161BQ96MY7 647 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 LBHD1Q9BQE6 289 aaPredicted RBP16.25■□□□□ 0.19
TCF4-262ENST00000628078 RCAN3Q9UKA8 241 aa16.25■□□□□ 0.19
TCF4-262ENST00000628078 MYH7P12883 1935 aa16.24■□□□□ 0.19
TCF4-262ENST00000628078 DNM1LO00429 736 aa16.24■□□□□ 0.19
TCF4-262ENST00000628078 TSHZ3Q63HK5 1081 aa16.24■□□□□ 0.19
TCF4-262ENST00000628078 AMOTL1Q8IY63 956 aa16.24■□□□□ 0.19
TCF4-262ENST00000628078 NUP88Q99567 741 aaPredicted RBP16.24■□□□□ 0.19
TCF4-262ENST00000628078 LRRCC1Q9C099 1032 aa16.24■□□□□ 0.19
TCF4-262ENST00000628078 PRDM5Q9NQX1 630 aaPredicted RBP16.24■□□□□ 0.19
TCF4-262ENST00000628078 SMCHD1A6NHR9 2005 aa16.24■□□□□ 0.19
TCF4-262ENST00000628078 MINDY4BA8MYZ0 360 aa16.23■□□□□ 0.19
TCF4-262ENST00000628078 MSCO60682 206 aa16.23■□□□□ 0.19
TCF4-262ENST00000628078 IGHA2P01877 340 aa16.23■□□□□ 0.19
TCF4-262ENST00000628078 FCER1AP12319 257 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms