RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 DHX29Q7Z478 1369 aaKnown RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 NWD1Q149M9 1564 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 ABCC3O15438 1527 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 NKTRP30414 1462 aaKnown RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 NCOA2Q15596 1464 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 PLEKHH2Q8IVE3 1493 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 SLC22A31A6NKX4 558 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 SOBPA7XYQ1 873 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 ALG1L2C9J202 215 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 GFRA2O00451 464 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 TNFRSF10CO14798 259 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 PGRP06401 933 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 VIL1P09327 827 aaKnown RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 EPHA1P21709 976 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 MAOBP27338 520 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 HSP90AA2PQ14568 343 aaPredicted RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 RASIP1Q5U651 963 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 CDCP2Q5VXM1 449 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 KIAA1211LQ6NV74 962 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 ADAMTSL4Q6UY14 1074 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 RUFY4Q6ZNE9 571 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 CDC37L1Q7L3B6 337 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 DEFB132Q7Z7B7 95 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 WFDC8Q8IUA0 241 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 NIM1KQ8IY84 436 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 VWA5B2Q8N398 1253 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 GOLGA6L1Q8N7Z2 621 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 STK35Q8TDR2 534 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 SMARCC1Q92922 1105 aaPredicted RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 ATG4CQ96DT6 458 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 PLPPR2Q96GM1 343 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 PSMD1Q99460 953 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 APBA2Q99767 749 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 CHMP4AQ9BY43 222 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 ZC3H12CQ9C0D7 883 aaKnown RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 IRF2BPLQ9H1B7 796 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 CAAP1Q9H8G2 361 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 CNNM2Q9H8M5 875 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 JPH1Q9HDC5 661 aaPredicted RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 KLHL42Q9P2K6 505 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 CFDP1Q9UEE9 299 aaPredicted RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 KLHL3Q9UH77 587 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 GDF2Q9UK05 429 aaPredicted RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 TRPC5Q9UL62 973 aaPredicted RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 TIAM1Q13009 1591 aa3.76□□□□□ -1.81
SCN8A-210ENST00000627665 INO80Q9ULG1 1556 aaPredicted RBP3.76□□□□□ -1.81
SCN8A-210ENST00000627665 SHPRHQ149N8 1683 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 ARHGAP23Q9P227 1491 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 AHDC1Q5TGY3 1603 aaPredicted RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 TRAV20A0A0B4J274 112 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 PRAMEF27A3QJZ7 478 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 FSCN2O14926 492 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 SUSD5O60279 629 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 DIAPH1O60610 1272 aaKnown RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 LILRB5O75023 590 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 RFPL3O75679 317 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 ADAMTS2O95450 1211 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 PDGFRBP09619 1106 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 MYCLP1P12525 358 aaPredicted RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 ATF3P18847 181 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 PMLP29590 882 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 CDC25BP30305 580 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 AMPD3Q01432 767 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 PTPN11Q06124 597 aaPredicted RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 SUZ12Q15022 739 aaKnown RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 PLEKHG6Q3KR16 790 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 SV2CQ496J9 727 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 FNDC3BQ53EP0 1204 aaKnown RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 OVOS1Q6IE37 1185 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 LRFN4Q6PJG9 635 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 SPATC1Q76KD6 591 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 CYFIP1Q7L576 1253 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 SCUBE1Q8IWY4 988 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 PHACTR4Q8IZ21 702 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 AHI1Q8N157 1196 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 CRACR2BQ8N4Y2 399 aaPredicted RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 ZNF507Q8TCN5 953 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 NANOS1Q8WY41 292 aaKnown RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 NINJ1Q92982 152 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 TRIM47Q96LD4 638 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 KIF2CQ99661 725 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 LPIN3Q9BQK8 851 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 RUSC1Q9BVN2 902 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 USP26Q9BXU7 913 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 GBP3Q9H0R5 595 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 GEMIN8Q9NWZ8 242 aaKnown RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 CACNA2D2Q9NY47 1150 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 USP21Q9UK80 565 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 ZNF214Q9UL59 606 aaPredicted RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 BLMP54132 1417 aaPredicted RBP3.75□□□□□ -1.81
SCN8A-210ENST00000627665 SLIT1O75093 1534 aa3.75□□□□□ -1.81
SCN8A-210ENST00000627665 SYNGAP1Q96PV0 1343 aa3.74□□□□□ -1.81
SCN8A-210ENST00000627665 ERVK-7P63135 1459 aa3.74□□□□□ -1.81
SCN8A-210ENST00000627665 NHSL1Q5SYE7 1610 aa3.74□□□□□ -1.81
SCN8A-210ENST00000627665 ANKRD34BA5PLL1 514 aa3.74□□□□□ -1.81
SCN8A-210ENST00000627665 NEURL1BA8MQ27 555 aa3.74□□□□□ -1.81
SCN8A-210ENST00000627665 B2RBV5 119 aa3.74□□□□□ -1.81
SCN8A-210ENST00000627665 RTEL1-TNFRSF6BF6WH68 1400 aa3.74□□□□□ -1.81
SCN8A-210ENST00000627665 LINC01387J3KSC0 135 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms