RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 IDH1O75874 414 aaKnown RBP9.78□□□□□ -0.84
CHD2-209ENST00000627185 ZNF202O95125 648 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 DEXIO95424 95 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 CALM1P0DP23 149 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 CALM2P0DP24 149 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 CALM3P0DP25 149 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 IARSP41252 1262 aaKnown RBP9.78□□□□□ -0.84
CHD2-209ENST00000627185 TPM4P67936 248 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 CHAF1AQ13111 956 aaPredicted RBP9.78□□□□□ -0.84
CHD2-209ENST00000627185 SEMA3FQ13275 785 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 SF3A1Q15459 793 aaKnown RBP9.78□□□□□ -0.84
CHD2-209ENST00000627185 KRT40Q6A162 431 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 KANK3Q6NY19 840 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 PI16Q6UXB8 463 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 MFSD6Q6ZSS7 791 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 CCDC186Q7Z3E2 898 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 LRRC8AQ8IWT6 810 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 SYNE4Q8N205 404 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 TRIML1Q8N9V2 468 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 SDF4Q9BRK5 362 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 RNF26Q9BY78 433 aaPredicted RBP9.78□□□□□ -0.84
CHD2-209ENST00000627185 ZSWIM5Q9P217 1185 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 WWC3Q9ULE0 1092 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 BCORQ6W2J9 1755 aa9.78□□□□□ -0.84
CHD2-209ENST00000627185 COL5A3P25940 1745 aaPredicted RBP9.77□□□□□ -0.85
CHD2-209ENST00000627185 DOT1LQ8TEK3 1739 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 SLC3A2P08195 630 aaKnown RBP9.77□□□□□ -0.85
CHD2-209ENST00000627185 NDUFA8P51970 172 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 HAND2P61296 217 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 SSRP1Q08945 709 aaKnown RBP9.77□□□□□ -0.85
CHD2-209ENST00000627185 TRIM29Q14134 588 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 SEC23AQ15436 765 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 TMEM67Q5HYA8 995 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 C11orf57Q6ZUT1 292 aaPredicted RBP9.77□□□□□ -0.85
CHD2-209ENST00000627185 FBXO33Q7Z6M2 555 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 CERS3Q8IU89 383 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 NOSTRINQ8IVI9 506 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 CCDC150Q8NCX0 1101 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 SPATA20Q8TB22 786 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 CLIP2Q9UDT6 1046 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 HOOK1Q9UJC3 728 aaKnown RBP9.77□□□□□ -0.85
CHD2-209ENST00000627185 DENND2AQ9ULE3 1009 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 PYCARDQ9ULZ3 195 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 CEP131Q9UPN4 1083 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 IQSEC3Q9UPP2 1182 aaPredicted RBP9.77□□□□□ -0.85
CHD2-209ENST00000627185 SLC12A7Q9Y666 1083 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 CLIC4Q9Y696 253 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 LTBP4Q8N2S1 1624 aa9.77□□□□□ -0.85
CHD2-209ENST00000627185 CCDC69A6NI79 296 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 GOLGA8AA7E2F4 631 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 B4E1Z4 1266 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 KIF28PB7ZC32 967 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 ORC4O43929 436 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 RANBP6O60518 1105 aaKnown RBP9.76□□□□□ -0.85
CHD2-209ENST00000627185 MBD4O95243 580 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 MMP1P03956 469 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 CDC27P30260 824 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 CHRNDQ07001 517 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 NCAPHQ15003 741 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 SAFBQ15424 915 aaKnown RBP eCLIP9.76□□□□□ -0.85
CHD2-209ENST00000627185 GLIPR1L2Q4G1C9 344 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 SBK1Q52WX2 424 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 CHST3Q7LGC8 479 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 NBPF11Q86T75 865 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 FCHSD1Q86WN1 690 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 TRIM22Q8IYM9 498 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 CRACR2BQ8N4Y2 399 aaPredicted RBP9.76□□□□□ -0.85
CHD2-209ENST00000627185 MAGEB6Q8N7X4 407 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 MARCH10Q8NA82 808 aaPredicted RBP9.76□□□□□ -0.85
CHD2-209ENST00000627185 ARMC2Q8NEN0 867 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 ESR2Q92731 530 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 RIOK1Q9BRS2 568 aaKnown RBP9.76□□□□□ -0.85
CHD2-209ENST00000627185 NYXQ9GZU5 481 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 RBM28Q9NW13 759 aaKnown RBP9.76□□□□□ -0.85
CHD2-209ENST00000627185 PHLPP1O60346 1717 aa9.76□□□□□ -0.85
CHD2-209ENST00000627185 ERICH2A1L162 156 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 POM121CA8CG34 1229 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 IFIT3O14879 490 aaKnown RBP9.75□□□□□ -0.85
CHD2-209ENST00000627185 CCP110O43303 1012 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 CBFA2T2O43439 604 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 WDHD1O75717 1129 aaPredicted RBP9.75□□□□□ -0.85
CHD2-209ENST00000627185 DDAH1O94760 285 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 PFKFB1P16118 471 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 PTGS1P23219 599 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 SYKP43405 635 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 TRAPPC10P48553 1259 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 SARSP49591 514 aaKnown RBP9.75□□□□□ -0.85
CHD2-209ENST00000627185 ITPK1Q13572 414 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 RTN1Q16799 776 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 PTCRAQ6ISU1 281 aaPredicted RBP9.75□□□□□ -0.85
CHD2-209ENST00000627185 C15orf52Q6ZUT6 534 aaKnown RBP9.75□□□□□ -0.85
CHD2-209ENST00000627185 FANCBQ8NB91 859 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 CCDC112Q8NEF3 446 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 CACTINQ8WUQ7 758 aaKnown RBP9.75□□□□□ -0.85
CHD2-209ENST00000627185 ANKRD7Q92527 254 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 ANKS1AQ92625 1134 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 CCDC34Q96HJ3 373 aa9.75□□□□□ -0.85
CHD2-209ENST00000627185 PYM1Q9BRP8 204 aaKnown RBP9.75□□□□□ -0.85
CHD2-209ENST00000627185 FTOQ9C0B1 505 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHD2-209ENST00000627185 ANKRD2Q9GZV1 360 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 245.1 ms