RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 USP5P45974 858 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 EPHB4P54760 987 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 OS9Q13438 667 aaPredicted RBP12.94□□□□□ -0.34
TCF4-253ENST00000626466 SEPT2Q15019 361 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 ABCB5Q2M3G0 1257 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 CERKLQ49MI3 558 aaPredicted RBP12.94□□□□□ -0.34
TCF4-253ENST00000626466 CCDC158Q5M9N0 1113 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 ATF7IPQ6VMQ6 1270 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 SLC39A5Q6ZMH5 540 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 TRIM43Q96BQ3 446 aaPredicted RBP12.94□□□□□ -0.34
TCF4-253ENST00000626466 EAF2Q96CJ1 260 aaPredicted RBP12.94□□□□□ -0.34
TCF4-253ENST00000626466 ZNF512BQ96KM6 892 aaPredicted RBP12.94□□□□□ -0.34
TCF4-253ENST00000626466 EHD4Q9H223 541 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 SEMA6BQ9H3T3 888 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 PDLIM7Q9NR12 457 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 SERPINB13Q9UIV8 391 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 IVNS1ABPQ9Y6Y0 642 aa12.94□□□□□ -0.34
TCF4-253ENST00000626466 A0A0G2JMZ2 1700 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 ZNF236Q9UL36 1845 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 MSCO60682 206 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 SURF6O75683 361 aaKnown RBP12.93□□□□□ -0.34
TCF4-253ENST00000626466 GLRX3O76003 335 aaKnown RBP12.93□□□□□ -0.34
TCF4-253ENST00000626466 ITGB8P26012 769 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 GABPAQ06546 454 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 SLC44A5Q8NCS7 719 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 SSH3Q8TE77 659 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 FERMT2Q96AC1 680 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 MYH1P12882 1939 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 RLFQ13129 1914 aa12.93□□□□□ -0.34
TCF4-253ENST00000626466 CUL9Q8IWT3 2517 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 SMIM22K7EJ46 135 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 CYP2D6P10635 497 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 ERCC3P19447 782 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 ADCYAP1R1P41586 468 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 USP14P54578 494 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 SNX17Q15036 470 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 OLFML2BQ68BL8 750 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 RIOK1Q9BRS2 568 aaKnown RBP12.92□□□□□ -0.34
TCF4-253ENST00000626466 SPATC1LQ9H0A9 340 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 PRKAG2Q9UGJ0 569 aa12.92□□□□□ -0.34
TCF4-253ENST00000626466 UNC80Q8N2C7 3258 aa12.91□□□□□ -0.34
TCF4-253ENST00000626466 ATP8B2P98198 1209 aa12.91□□□□□ -0.34
TCF4-253ENST00000626466 LRRC41Q15345 812 aa12.91□□□□□ -0.34
TCF4-253ENST00000626466 DPP9Q86TI2 863 aa12.91□□□□□ -0.34
TCF4-253ENST00000626466 MIER1Q8N108 512 aa12.91□□□□□ -0.34
TCF4-253ENST00000626466 USP38Q8NB14 1042 aa12.91□□□□□ -0.34
TCF4-253ENST00000626466 LENG1Q96BZ8 264 aaPredicted RBP12.91□□□□□ -0.34
TCF4-253ENST00000626466 ATG4CQ96DT6 458 aa12.91□□□□□ -0.34
TCF4-253ENST00000626466 KBTBD13C9JR72 458 aa12.9□□□□□ -0.34
TCF4-253ENST00000626466 SEPT4O43236 478 aa12.9□□□□□ -0.34
TCF4-253ENST00000626466 TLE2Q04725 743 aa12.9□□□□□ -0.34
TCF4-253ENST00000626466 TTC6Q86TZ1 520 aa12.9□□□□□ -0.34
TCF4-253ENST00000626466 SIAH1Q8IUQ4 282 aa12.9□□□□□ -0.34
TCF4-253ENST00000626466 TANGO6Q9C0B7 1094 aa12.9□□□□□ -0.34
TCF4-253ENST00000626466 NOP58Q9Y2X3 529 aaKnown RBP12.9□□□□□ -0.34
TCF4-253ENST00000626466 NAV1Q8NEY1 1877 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 MPHOSPH10O00566 681 aaKnown RBP12.89□□□□□ -0.35
TCF4-253ENST00000626466 RLBP1P12271 317 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 TAL1P17542 331 aaPredicted RBP12.89□□□□□ -0.35
TCF4-253ENST00000626466 SMAD3P84022 425 aaKnown RBP12.89□□□□□ -0.35
TCF4-253ENST00000626466 PLS1Q14651 629 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 COG2Q14746 738 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 SLFNL1Q499Z3 407 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 SPICE1Q8N0Z3 855 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 ARRDC4Q8NCT1 418 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 DYNLL2Q96FJ2 89 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 MAML3Q96JK9 1138 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 CABP5Q9NP86 173 aa12.89□□□□□ -0.35
TCF4-253ENST00000626466 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
TCF4-253ENST00000626466 POLR3DP05423 398 aaPredicted RBP12.88□□□□□ -0.35
TCF4-253ENST00000626466 NCAPG2Q86XI2 1143 aa12.88□□□□□ -0.35
TCF4-253ENST00000626466 SHCBP1Q8NEM2 672 aa12.88□□□□□ -0.35
TCF4-253ENST00000626466 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
TCF4-253ENST00000626466 MCM9Q9NXL9 1143 aa12.88□□□□□ -0.35
TCF4-253ENST00000626466 EYSQ5T1H1 3165 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 MAGEB6P1A0A0J9YX57 407 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 PGK1P00558 417 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 PGK2P07205 417 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 AKR1B1P15121 316 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 FOSL2P15408 326 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 PDE6AP16499 860 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 AACSQ86V21 672 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 LCORLQ8N3X6 602 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
TCF4-253ENST00000626466 PRDM6Q9NQX0 595 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 FBXO28Q9NVF7 368 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 PHF24Q9UPV7 400 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 EXOC6BQ9Y2D4 811 aa12.87□□□□□ -0.35
TCF4-253ENST00000626466 DNAH12Q6ZR08 3092 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 CYP2D7A0A087X1C5 515 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 PRKAB2O43741 272 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 STRNO43815 780 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 FLOT1O75955 427 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 CHGBP05060 677 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 IRX5P78411 483 aaPredicted RBP12.86□□□□□ -0.35
TCF4-253ENST00000626466 MAP3K12Q12852 859 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 GRIN2CQ14957 1233 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 TMEM132BQ14DG7 1078 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms