RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 SENP6Q9GZR1 1112 aaPredicted RBP22.93■■□□□ 1.26
SMN1-211ENST00000625245 CYP2C19P33261 490 aa22.92■■□□□ 1.26
SMN1-211ENST00000625245 TDHQ8IZJ6 230 aa22.92■■□□□ 1.26
SMN1-211ENST00000625245 SLC17A8Q8NDX2 589 aa22.92■■□□□ 1.26
SMN1-211ENST00000625245 BOLA2Q9H3K6 86 aa22.92■■□□□ 1.26
SMN1-211ENST00000625245 DDX20Q9UHI6 824 aaKnown RBP22.92■■□□□ 1.26
SMN1-211ENST00000625245 COG6Q9Y2V7 657 aa22.92■■□□□ 1.26
SMN1-211ENST00000625245 BAZ2AQ9UIF9 1905 aaKnown RBP22.92■■□□□ 1.26
SMN1-211ENST00000625245 HOXC6P09630 235 aa22.91■■□□□ 1.26
SMN1-211ENST00000625245 SLFNL1Q499Z3 407 aa22.91■■□□□ 1.26
SMN1-211ENST00000625245 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
SMN1-211ENST00000625245 SAMD1Q6SPF0 538 aaPredicted RBP22.91■■□□□ 1.26
SMN1-211ENST00000625245 TMEM179Q6ZVK1 233 aa22.91■■□□□ 1.26
SMN1-211ENST00000625245 MOV10L1Q9BXT6 1211 aaKnown RBP22.91■■□□□ 1.26
SMN1-211ENST00000625245 PAG1Q9NWQ8 432 aa22.91■■□□□ 1.26
SMN1-211ENST00000625245 DDX19BQ9UMR2 479 aa22.91■■□□□ 1.26
SMN1-211ENST00000625245 PRKAB2O43741 272 aa22.9■■□□□ 1.26
SMN1-211ENST00000625245 RAB11FIP3O75154 756 aa22.9■■□□□ 1.26
SMN1-211ENST00000625245 MBD4O95243 580 aa22.9■■□□□ 1.26
SMN1-211ENST00000625245 MDM2Q00987 491 aaPredicted RBP22.9■■□□□ 1.26
SMN1-211ENST00000625245 PLS1Q14651 629 aa22.9■■□□□ 1.26
SMN1-211ENST00000625245 SIRT2Q8IXJ6 389 aa22.9■■□□□ 1.26
SMN1-211ENST00000625245 SWAP70Q9UH65 585 aa22.9■■□□□ 1.26
SMN1-211ENST00000625245 MSCO60682 206 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 ADORA2AP29274 412 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 ATN1P54259 1190 aaPredicted RBP22.89■■□□□ 1.25
SMN1-211ENST00000625245 KIAA1755Q5JYT7 1200 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 CLEC10AQ8IUN9 316 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 DEFB123Q8N688 67 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 TRPV1Q8NER1 839 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 SPATC1LQ9H0A9 340 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 ARHGEF10LQ9HCE6 1279 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 ZBTB40Q9NUA8 1239 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 LAMA3Q16787 3333 aa22.89■■□□□ 1.25
SMN1-211ENST00000625245 STRNO43815 780 aa22.88■■□□□ 1.25
SMN1-211ENST00000625245 FLOT1O75955 427 aa22.88■■□□□ 1.25
SMN1-211ENST00000625245 AKR1B1P15121 316 aa22.88■■□□□ 1.25
SMN1-211ENST00000625245 ERCC3P19447 782 aa22.88■■□□□ 1.25
SMN1-211ENST00000625245 ADD2P35612 726 aa22.88■■□□□ 1.25
SMN1-211ENST00000625245 LRIT3Q3SXY7 679 aa22.88■■□□□ 1.25
SMN1-211ENST00000625245 SPICE1Q8N0Z3 855 aa22.88■■□□□ 1.25
SMN1-211ENST00000625245 LPAR1Q92633 364 aa22.88■■□□□ 1.25
SMN1-211ENST00000625245 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.88■■□□□ 1.25
SMN1-211ENST00000625245 RLFQ13129 1914 aa22.88■■□□□ 1.25
SMN1-211ENST00000625245 CYP2D7A0A087X1C5 515 aa22.87■■□□□ 1.25
SMN1-211ENST00000625245 DSG3P32926 999 aa22.87■■□□□ 1.25
SMN1-211ENST00000625245 ICA1Q05084 483 aa22.87■■□□□ 1.25
SMN1-211ENST00000625245 Q7L0L9 218 aa22.87■■□□□ 1.25
SMN1-211ENST00000625245 NCAPG2Q86XI2 1143 aa22.87■■□□□ 1.25
SMN1-211ENST00000625245 AMOTL1Q8IY63 956 aa22.87■■□□□ 1.25
SMN1-211ENST00000625245 ATP8A2Q9NTI2 1148 aa22.87■■□□□ 1.25
SMN1-211ENST00000625245 ZNFX1Q9P2E3 1918 aaKnown RBP22.86■■□□□ 1.25
SMN1-211ENST00000625245 ATP5JP18859 108 aa22.86■■□□□ 1.25
SMN1-211ENST00000625245 ANO1Q5XXA6 986 aa22.86■■□□□ 1.25
SMN1-211ENST00000625245 GPR153Q6NV75 609 aa22.86■■□□□ 1.25
SMN1-211ENST00000625245 SIAH1Q8IUQ4 282 aa22.86■■□□□ 1.25
SMN1-211ENST00000625245 MB21D1Q8N884 522 aa22.86■■□□□ 1.25
SMN1-211ENST00000625245 SHCBP1Q8NEM2 672 aa22.86■■□□□ 1.25
SMN1-211ENST00000625245 ATG4CQ96DT6 458 aa22.86■■□□□ 1.25
SMN1-211ENST00000625245 SH2D4AQ9H788 454 aa22.86■■□□□ 1.25
SMN1-211ENST00000625245 MYH7P12883 1935 aa22.86■■□□□ 1.25
SMN1-211ENST00000625245 USP17L12C9JPN9 530 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 USP17L21D6R901 530 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 SMIM22K7EJ46 135 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 COBLO75128 1261 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 MYCNP04198 464 aaPredicted RBP22.85■■□□□ 1.25
SMN1-211ENST00000625245 CHGBP05060 677 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 CYBAP13498 195 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 CDK8P49336 464 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 GJC2Q5T442 439 aaPredicted RBP22.85■■□□□ 1.25
SMN1-211ENST00000625245 OLFML2BQ68BL8 750 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 DDRGK1Q96HY6 314 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 CCDC17Q96LX7 622 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 HAUS7Q99871 368 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 LBHD1Q9BQE6 289 aaPredicted RBP22.85■■□□□ 1.25
SMN1-211ENST00000625245 MROH8Q9H579 483 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 VCPKMTQ9H867 229 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 SLC5A4Q9NY91 659 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 TMX2Q9Y320 296 aa22.85■■□□□ 1.25
SMN1-211ENST00000625245 DNM1LO00429 736 aa22.84■■□□□ 1.25
SMN1-211ENST00000625245 C12orf60Q5U649 245 aa22.84■■□□□ 1.25
SMN1-211ENST00000625245 ARRDC4Q8NCT1 418 aa22.84■■□□□ 1.25
SMN1-211ENST00000625245 CHMP4BQ9H444 224 aaKnown RBP22.84■■□□□ 1.25
SMN1-211ENST00000625245 A0A0G2JMZ2 1700 aa22.83■■□□□ 1.25
SMN1-211ENST00000625245 PRAMEF19Q5SWL8 479 aa22.83■■□□□ 1.25
SMN1-211ENST00000625245 PRKAG2Q9UGJ0 569 aa22.83■■□□□ 1.25
SMN1-211ENST00000625245 SLC4A4Q9Y6R1 1079 aa22.83■■□□□ 1.25
SMN1-211ENST00000625245 ZNF236Q9UL36 1845 aa22.82■■□□□ 1.24
SMN1-211ENST00000625245 WDR46O15213 610 aaKnown RBP22.82■■□□□ 1.24
SMN1-211ENST00000625245 RAD21O60216 631 aa22.82■■□□□ 1.24
SMN1-211ENST00000625245 IGHA2P01877 340 aa22.82■■□□□ 1.24
SMN1-211ENST00000625245 RTP1P59025 263 aa22.82■■□□□ 1.24
SMN1-211ENST00000625245 UBE3CQ15386 1083 aa22.82■■□□□ 1.24
SMN1-211ENST00000625245 ATP11BQ9Y2G3 1177 aa22.82■■□□□ 1.24
SMN1-211ENST00000625245 SMCHD1A6NHR9 2005 aa22.81■■□□□ 1.24
SMN1-211ENST00000625245 COL11A1P12107 1806 aaPredicted RBP22.81■■□□□ 1.24
SMN1-211ENST00000625245 PARP14Q460N5 1801 aa22.81■■□□□ 1.24
SMN1-211ENST00000625245 KBTBD13C9JR72 458 aa22.81■■□□□ 1.24
SMN1-211ENST00000625245 DLL1O00548 723 aa22.81■■□□□ 1.24
SMN1-211ENST00000625245 SEPT4O43236 478 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms