RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 GJA8P48165 433 aa15.05■□□□□ -0
PNKP-217ENST00000625216 ICA1Q05084 483 aa15.05■□□□□ -0
PNKP-217ENST00000625216 COG2Q14746 738 aa15.05■□□□□ -0
PNKP-217ENST00000625216 Q3C1V9 767 aa15.05■□□□□ -0
PNKP-217ENST00000625216 SOCS4Q8WXH5 440 aa15.05■□□□□ -0
PNKP-217ENST00000625216 EVI5LQ96CN4 794 aa15.05■□□□□ -0
PNKP-217ENST00000625216 NUDT12Q9BQG2 462 aa15.05■□□□□ -0
PNKP-217ENST00000625216 PAGR1Q9BTK6 254 aa15.05■□□□□ -0
PNKP-217ENST00000625216 FSD1Q9BTV5 496 aa15.05■□□□□ -0
PNKP-217ENST00000625216 NACAP1Q9BZK3 213 aa15.05■□□□□ -0
PNKP-217ENST00000625216 RPAP3Q9H6T3 665 aaPredicted RBP15.05■□□□□ -0
PNKP-217ENST00000625216 ZNF287Q9HBT7 754 aa15.05■□□□□ -0
PNKP-217ENST00000625216 DDX60LQ5H9U9 1706 aaKnown RBP15.05■□□□□ -0
PNKP-217ENST00000625216 PDE4DIPQ5VU43 2346 aa15.05■□□□□ -0
PNKP-217ENST00000625216 APPP05067 770 aa15.04■□□□□ -0
PNKP-217ENST00000625216 INHAP05111 366 aa15.04■□□□□ -0
PNKP-217ENST00000625216 XRCC5P13010 732 aaKnown RBP15.04■□□□□ -0
PNKP-217ENST00000625216 ELNP15502 786 aa15.04■□□□□ -0
PNKP-217ENST00000625216 ZMYM1Q5SVZ6 1142 aa15.04■□□□□ -0
PNKP-217ENST00000625216 SIAH1Q8IUQ4 282 aa15.04■□□□□ -0
PNKP-217ENST00000625216 TRMT44Q8IYL2 757 aaKnown RBP15.04■□□□□ -0
PNKP-217ENST00000625216 MKNK2Q9HBH9 465 aa15.04■□□□□ -0
PNKP-217ENST00000625216 ZSWIM8A7E2V4 1837 aa15.03■□□□□ -0
PNKP-217ENST00000625216 BRCA2P51587 3418 aa15.03■□□□□ -0
PNKP-217ENST00000625216 MINDY4BA8MYZ0 360 aa15.03■□□□□ -0
PNKP-217ENST00000625216 SMIM22K7EJ46 135 aa15.03■□□□□ -0
PNKP-217ENST00000625216 HMGCRP04035 888 aa15.03■□□□□ -0
PNKP-217ENST00000625216 TDO2P48775 406 aa15.03■□□□□ -0
PNKP-217ENST00000625216 MFAP1P55081 439 aaKnown RBP15.03■□□□□ -0
PNKP-217ENST00000625216 POTEEQ6S8J3 1075 aa15.03■□□□□ -0
PNKP-217ENST00000625216 PLEKHH3Q7Z736 793 aa15.03■□□□□ -0
PNKP-217ENST00000625216 IFNL3Q8IZI9 196 aa15.03■□□□□ -0
PNKP-217ENST00000625216 VCPKMTQ9H867 229 aa15.03■□□□□ -0
PNKP-217ENST00000625216 RBM19Q9Y4C8 960 aaKnown RBP15.03■□□□□ -0
PNKP-217ENST00000625216 NAV1Q8NEY1 1877 aa15.02■□□□□ -0
PNKP-217ENST00000625216 SPDYE16A6NNV3 312 aaPredicted RBP15.02■□□□□ -0
PNKP-217ENST00000625216 M0R2C6 588 aa15.02■□□□□ -0
PNKP-217ENST00000625216 CNMDO75829 334 aa15.02■□□□□ -0
PNKP-217ENST00000625216 SGPL1O95470 568 aa15.02■□□□□ -0
PNKP-217ENST00000625216 GPR142Q7Z601 462 aa15.02■□□□□ -0
PNKP-217ENST00000625216 MB21D1Q8N884 522 aa15.02■□□□□ -0
PNKP-217ENST00000625216 U2AF1L4Q8WU68 220 aaKnown RBP15.02■□□□□ -0
PNKP-217ENST00000625216 ESYT1Q9BSJ8 1104 aa15.02■□□□□ -0
PNKP-217ENST00000625216 UNC93B1Q9H1C4 597 aa15.02■□□□□ -0
PNKP-217ENST00000625216 PORCNQ9H237 461 aa15.02■□□□□ -0
PNKP-217ENST00000625216 IL25Q9H293 177 aa15.02■□□□□ -0
PNKP-217ENST00000625216 CWC22Q9HCG8 908 aaKnown RBP15.02■□□□□ -0
PNKP-217ENST00000625216 EPB41L4AQ9HCS5 686 aaPredicted RBP15.02■□□□□ -0
PNKP-217ENST00000625216 MKI67P46013 3256 aaKnown RBP15.02□□□□□ -0.01
PNKP-217ENST00000625216 ROBO3Q96MS0 1386 aa15.01□□□□□ -0.01
PNKP-217ENST00000625216 WDR46O15213 610 aaKnown RBP15.01□□□□□ -0.01
PNKP-217ENST00000625216 PEX10O60683 326 aa15.01□□□□□ -0.01
PNKP-217ENST00000625216 SLC3A2P08195 630 aaKnown RBP15.01□□□□□ -0.01
PNKP-217ENST00000625216 EEF2P13639 858 aaKnown RBP15.01□□□□□ -0.01
PNKP-217ENST00000625216 CYP2B6P20813 491 aa15.01□□□□□ -0.01
PNKP-217ENST00000625216 RGS2P41220 211 aa15.01□□□□□ -0.01
PNKP-217ENST00000625216 MORN1Q5T089 497 aa15.01□□□□□ -0.01
PNKP-217ENST00000625216 ZNF444Q8N0Y2 327 aaPredicted RBP15.01□□□□□ -0.01
PNKP-217ENST00000625216 USP6NLQ92738 828 aa15.01□□□□□ -0.01
PNKP-217ENST00000625216 TANGO6Q9C0B7 1094 aa15.01□□□□□ -0.01
PNKP-217ENST00000625216 GOPCQ9HD26 462 aa15.01□□□□□ -0.01
PNKP-217ENST00000625216 PAK6Q9NQU5 681 aaPredicted RBP15.01□□□□□ -0.01
PNKP-217ENST00000625216 RBBP6Q7Z6E9 1792 aaKnown RBP15.01□□□□□ -0.01
PNKP-217ENST00000625216 RPTORQ8N122 1335 aa15□□□□□ -0.01
PNKP-217ENST00000625216 RASA1P20936 1047 aa15□□□□□ -0.01
PNKP-217ENST00000625216 DSG3P32926 999 aa15□□□□□ -0.01
PNKP-217ENST00000625216 ATP2B2Q01814 1243 aa15□□□□□ -0.01
PNKP-217ENST00000625216 CASC1Q6TDU7 716 aa15□□□□□ -0.01
PNKP-217ENST00000625216 SHISA4Q96DD7 197 aa15□□□□□ -0.01
PNKP-217ENST00000625216 SEC62Q99442 399 aaKnown RBP15□□□□□ -0.01
PNKP-217ENST00000625216 GNL3Q9BVP2 549 aaKnown RBP eCLIP15□□□□□ -0.01
PNKP-217ENST00000625216 NAPBQ9H115 298 aa15□□□□□ -0.01
PNKP-217ENST00000625216 HMX1Q9NP08 348 aaPredicted RBP15□□□□□ -0.01
PNKP-217ENST00000625216 HELLSQ9NRZ9 838 aa15□□□□□ -0.01
PNKP-217ENST00000625216 BTBD7Q9P203 1132 aa15□□□□□ -0.01
PNKP-217ENST00000625216 NYAP2Q9P242 653 aa15□□□□□ -0.01
PNKP-217ENST00000625216 SLC15A5A6NIM6 579 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 STRNO43815 780 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 FLOT1O75955 427 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 TFRCP02786 760 aaKnown RBP14.99□□□□□ -0.01
PNKP-217ENST00000625216 PTPREP23469 700 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 PDE4BQ07343 736 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 MAP2K5Q13163 448 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 NMIQ13287 307 aaPredicted RBP14.99□□□□□ -0.01
PNKP-217ENST00000625216 KIAA1755Q5JYT7 1200 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 CLEC10AQ8IUN9 316 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 SHCBP1Q8NEM2 672 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 DEFB118Q96PH6 123 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 CRISPLD2Q9H0B8 497 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.99□□□□□ -0.01
PNKP-217ENST00000625216 DIAPH3Q9NSV4 1193 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 SYNPO2Q9UMS6 1093 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 IVNS1ABPQ9Y6Y0 642 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 MGAMO43451 1857 aa14.99□□□□□ -0.01
PNKP-217ENST00000625216 A0A0D9SFI3 127 aa14.98□□□□□ -0.01
PNKP-217ENST00000625216 SGSM2O43147 1006 aa14.98□□□□□ -0.01
PNKP-217ENST00000625216 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
PNKP-217ENST00000625216 MAP3K21Q5TCX8 1036 aa14.98□□□□□ -0.01
PNKP-217ENST00000625216 UBE2Q1Q7Z7E8 422 aa14.98□□□□□ -0.01
PNKP-217ENST00000625216 SPICE1Q8N0Z3 855 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms