RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 ZSCAN10Q96SZ4 725 aaPredicted RBP17.3■□□□□ 0.36
LINC00552-201ENST00000625151 V9GY48 417 aaPredicted RBP17.3■□□□□ 0.36
LINC00552-201ENST00000625151 MYH13Q9UKX3 1938 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 COL1A1P02452 1464 aaPredicted RBP17.29■□□□□ 0.36
LINC00552-201ENST00000625151 XBP1P17861 261 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 PBX1P40424 430 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 DPYDQ12882 1025 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 ITPK1Q13572 414 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 CDKAL1Q5VV42 579 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 INTS5Q6P9B9 1019 aaKnown RBP17.29■□□□□ 0.36
LINC00552-201ENST00000625151 IGSF22Q8N9C0 903 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 CPLX3Q8WVH0 158 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 RIOK1Q9BRS2 568 aaKnown RBP17.29■□□□□ 0.36
LINC00552-201ENST00000625151 ADD3Q9UEY8 706 aaKnown RBP17.29■□□□□ 0.36
LINC00552-201ENST00000625151 TRPC5Q9UL62 973 aaPredicted RBP17.29■□□□□ 0.36
LINC00552-201ENST00000625151 A0A1B0GUL6 1792 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 WTIPA6NIX2 430 aaPredicted RBP17.29■□□□□ 0.36
LINC00552-201ENST00000625151 PRPF3O43395 683 aaKnown RBP17.29■□□□□ 0.36
LINC00552-201ENST00000625151 SASH3O75995 380 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 CCDC175P0C221 793 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 PPP2R5BQ15173 497 aa17.29■□□□□ 0.36
LINC00552-201ENST00000625151 GPR161Q8N6U8 529 aaKnown RBP17.29■□□□□ 0.36
LINC00552-201ENST00000625151 CCDC12Q8WUD4 166 aaPredicted RBP17.29■□□□□ 0.36
LINC00552-201ENST00000625151 PPP1R3GB7ZBB8 358 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 GYG1P46976 350 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 DYNLL1P63167 89 aaKnown RBP17.28■□□□□ 0.36
LINC00552-201ENST00000625151 ZNF174Q15697 407 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 NPY5RQ15761 445 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 IFIT1BQ5T764 474 aaKnown RBP17.28■□□□□ 0.36
LINC00552-201ENST00000625151 CC2D1AQ6P1N0 951 aaPredicted RBP17.28■□□□□ 0.36
LINC00552-201ENST00000625151 SEPT12Q8IYM1 358 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 STAMQ92783 540 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 LZTFL1Q9NQ48 299 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
LINC00552-201ENST00000625151 NTSR2O95665 410 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 CT47A1Q5JQC4 288 aaPredicted RBP17.28■□□□□ 0.36
LINC00552-201ENST00000625151 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 ADGRG1Q9Y653 693 aa17.28■□□□□ 0.36
LINC00552-201ENST00000625151 LOC102724428A0A0B4J2F2 783 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 ERICH4A6NGS2 130 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 COBLO75128 1261 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 CAMTA2O94983 1202 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 SIK1P57059 783 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 TROAPQ12815 778 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 PPFIBP1Q86W92 1011 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 FERMT2Q96AC1 680 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 CCDC34Q96HJ3 373 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 GSDMAQ96QA5 445 aa17.27■□□□□ 0.36
LINC00552-201ENST00000625151 ZNF804BA4D1E1 1349 aa17.27■□□□□ 0.35
LINC00552-201ENST00000625151 ONECUT3O60422 494 aaPredicted RBP17.27■□□□□ 0.35
LINC00552-201ENST00000625151 ATP6V1AP38606 617 aa17.27■□□□□ 0.35
LINC00552-201ENST00000625151 CATIPQ7Z7H3 387 aa17.27■□□□□ 0.35
LINC00552-201ENST00000625151 PARD6BQ9BYG5 372 aa17.27■□□□□ 0.35
LINC00552-201ENST00000625151 CCDC87Q9NVE4 849 aa17.27■□□□□ 0.35
LINC00552-201ENST00000625151 MFAP3LO75121 409 aa17.26■□□□□ 0.35
LINC00552-201ENST00000625151 GTF2E1P29083 439 aaPredicted RBP17.26■□□□□ 0.35
LINC00552-201ENST00000625151 CRKLP46109 303 aaKnown RBP17.26■□□□□ 0.35
LINC00552-201ENST00000625151 XDHP47989 1333 aa17.26■□□□□ 0.35
LINC00552-201ENST00000625151 CASP14P31944 242 aa17.26■□□□□ 0.35
LINC00552-201ENST00000625151 EVX2Q03828 476 aa17.26■□□□□ 0.35
LINC00552-201ENST00000625151 PARP10Q53GL7 1025 aa17.26■□□□□ 0.35
LINC00552-201ENST00000625151 TTC38Q5R3I4 469 aa17.26■□□□□ 0.35
LINC00552-201ENST00000625151 RABGGTAQ92696 567 aa17.26■□□□□ 0.35
LINC00552-201ENST00000625151 CTNND2Q9UQB3 1225 aa17.26■□□□□ 0.35
LINC00552-201ENST00000625151 NIP7Q9Y221 180 aaKnown RBP eCLIP17.26■□□□□ 0.35
LINC00552-201ENST00000625151 GYPCP04921 128 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 FAM193AP78312 1265 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 PTGDRQ13258 359 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 ZNF384Q8TF68 577 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 GOLGA1Q92805 767 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 NAA15Q9BXJ9 866 aaKnown RBP17.25■□□□□ 0.35
LINC00552-201ENST00000625151 UBXN6Q9BZV1 441 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 BLZF1Q9H2G9 400 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 RBM28Q9NW13 759 aaKnown RBP17.25■□□□□ 0.35
LINC00552-201ENST00000625151 CASZ1Q86V15 1759 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 ATP8B1O43520 1251 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 FXR1P51114 621 aaKnown RBP eCLIP17.25■□□□□ 0.35
LINC00552-201ENST00000625151 TMTC3Q6ZXV5 915 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 IPO4Q8TEX9 1081 aaKnown RBP17.25■□□□□ 0.35
LINC00552-201ENST00000625151 CTAGE1Q96RT6 745 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 ZSWIM4Q9H7M6 989 aa17.25■□□□□ 0.35
LINC00552-201ENST00000625151 POLR3GO15318 223 aaPredicted RBP17.24■□□□□ 0.35
LINC00552-201ENST00000625151 BMP15O95972 392 aa17.24■□□□□ 0.35
LINC00552-201ENST00000625151 CCT6AP40227 531 aaKnown RBP17.24■□□□□ 0.35
LINC00552-201ENST00000625151 ATP2C1P98194 919 aaPredicted RBP17.24■□□□□ 0.35
LINC00552-201ENST00000625151 E2F4Q16254 413 aa17.24■□□□□ 0.35
LINC00552-201ENST00000625151 IQCA1Q86XH1 822 aa17.24■□□□□ 0.35
LINC00552-201ENST00000625151 CREBRFQ8IUR6 639 aa17.24■□□□□ 0.35
LINC00552-201ENST00000625151 SEMA3EO15041 775 aa17.24■□□□□ 0.35
LINC00552-201ENST00000625151 CYP2C19P33261 490 aa17.24■□□□□ 0.35
LINC00552-201ENST00000625151 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
LINC00552-201ENST00000625151 SRBD1Q8N5C6 995 aaKnown RBP17.24■□□□□ 0.35
LINC00552-201ENST00000625151 BRMS1Q9HCU9 246 aa17.24■□□□□ 0.35
LINC00552-201ENST00000625151 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
LINC00552-201ENST00000625151 ADAMTS3O15072 1205 aa17.23■□□□□ 0.35
LINC00552-201ENST00000625151 NMT2O60551 498 aa17.23■□□□□ 0.35
LINC00552-201ENST00000625151 FILIP1LQ4L180 1135 aa17.23■□□□□ 0.35
LINC00552-201ENST00000625151 TAF3Q5VWG9 929 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms