RNA–Protein interactions for RNA: ENST00000623498.3

SEM1-223, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 5 BASIC

Gene SEM1, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-223ENST00000623498 CLIP2Q9UDT6 1046 aa10.39□□□□□ -0.75
SEM1-223ENST00000623498 ZNF112Q9UJU3 913 aa10.39□□□□□ -0.75
SEM1-223ENST00000623498 ZBTB21Q9ULJ3 1066 aa10.39□□□□□ -0.75
SEM1-223ENST00000623498 SCAF8Q9UPN6 1271 aaKnown RBP10.39□□□□□ -0.75
SEM1-223ENST00000623498 SMC3Q9UQE7 1217 aa10.39□□□□□ -0.75
SEM1-223ENST00000623498 KIF3AQ9Y496 699 aa10.39□□□□□ -0.75
SEM1-223ENST00000623498 SLURP2P0DP57 97 aa10.38□□□□□ -0.75
SEM1-223ENST00000623498 GUCY1A2P33402 732 aa10.38□□□□□ -0.75
SEM1-223ENST00000623498 ICA1Q05084 483 aa10.38□□□□□ -0.75
SEM1-223ENST00000623498 RRP1BQ14684 758 aaKnown RBP10.38□□□□□ -0.75
SEM1-223ENST00000623498 GRM4Q14833 912 aa10.38□□□□□ -0.75
SEM1-223ENST00000623498 SEPT2Q15019 361 aa10.38□□□□□ -0.75
SEM1-223ENST00000623498 RAB3GAP1Q15042 981 aa10.38□□□□□ -0.75
SEM1-223ENST00000623498 SPRYD3Q8NCJ5 442 aa10.38□□□□□ -0.75
SEM1-223ENST00000623498 CDCA5Q96FF9 252 aa10.38□□□□□ -0.75
SEM1-223ENST00000623498 LZTS2Q9BRK4 669 aa10.38□□□□□ -0.75
SEM1-223ENST00000623498 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
SEM1-223ENST00000623498 ADM5C9JUS6 153 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 EEF2P13639 858 aaKnown RBP10.37□□□□□ -0.75
SEM1-223ENST00000623498 PDCP20941 246 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 SMARCA1P28370 1054 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 IREB2P48200 963 aaKnown RBP10.37□□□□□ -0.75
SEM1-223ENST00000623498 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 ST3GAL1Q11201 340 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 PRAMEF18Q5VWM3 479 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 SCYL3Q8IZE3 742 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 SMARCC2Q8TAQ2 1214 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 MYL10Q9BUA6 226 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 FOXD4L1Q9NU39 408 aa10.37□□□□□ -0.75
SEM1-223ENST00000623498 TRPM7Q96QT4 1865 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 UNCXA6NJT0 531 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 USP17L5A8MUK1 530 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 USP2O75604 605 aaPredicted RBP10.36□□□□□ -0.75
SEM1-223ENST00000623498 PARP1P09874 1014 aaKnown RBP10.36□□□□□ -0.75
SEM1-223ENST00000623498 IFNAR1P17181 557 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 RXRAP19793 462 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 CDC27P30260 824 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 ADD1P35611 737 aaKnown RBP10.36□□□□□ -0.75
SEM1-223ENST00000623498 MAP3K9P80192 1104 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 NUCB2P80303 420 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 ASPRV1Q53RT3 343 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 NOL9Q5SY16 702 aaKnown RBP10.36□□□□□ -0.75
SEM1-223ENST00000623498 ARMC9Q7Z3E5 817 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 RAB11FIP4Q86YS3 637 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 SIAH1Q8IUQ4 282 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 TRIM22Q8IYM9 498 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 FAM184AQ8NB25 1140 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 SMC1BQ8NDV3 1235 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 RGS22Q8NE09 1264 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 NSUN7Q8NE18 718 aaKnown RBP10.36□□□□□ -0.75
SEM1-223ENST00000623498 GMCL1P1Q8NEA9 526 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 WASF1Q92558 559 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 WRNIP1Q96S55 665 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 GLIS2Q9BZE0 524 aaPredicted RBP10.36□□□□□ -0.75
SEM1-223ENST00000623498 AS3MTQ9HBK9 375 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 NCOA5Q9HCD5 579 aaKnown RBP10.36□□□□□ -0.75
SEM1-223ENST00000623498 PICK1Q9NRD5 415 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 FAM217BQ9NTX9 383 aaPredicted RBP10.36□□□□□ -0.75
SEM1-223ENST00000623498 RBM27Q9P2N5 1060 aaKnown RBP10.36□□□□□ -0.75
SEM1-223ENST00000623498 TMX2Q9Y320 296 aa10.36□□□□□ -0.75
SEM1-223ENST00000623498 STK36Q9NRP7 1315 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 SSC5DA1L4H1 1573 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 PHIPQ8WWQ0 1821 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 PALM3A6NDB9 673 aaPredicted RBP10.35□□□□□ -0.75
SEM1-223ENST00000623498 CTDNEP1O95476 244 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 SNHG28P0DPA3 235 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 GJB2P29033 226 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 INPP5BP32019 993 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 DDIT3P35638 169 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 JAG1P78504 1218 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 AKAP17AQ02040 695 aaKnown RBP10.35□□□□□ -0.75
SEM1-223ENST00000623498 MLLT1Q03111 559 aaPredicted RBP10.35□□□□□ -0.75
SEM1-223ENST00000623498 SSRP1Q08945 709 aaKnown RBP10.35□□□□□ -0.75
SEM1-223ENST00000623498 NTRK3Q16288 839 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 MAP3K11Q16584 847 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 GPATCH4Q5T3I0 446 aaKnown RBP10.35□□□□□ -0.75
SEM1-223ENST00000623498 SLFN13Q68D06 897 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 TMTC3Q6ZXV5 915 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 CCDC144CPQ8IYA2 1237 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 LRRC47Q8N1G4 583 aaKnown RBP10.35□□□□□ -0.75
SEM1-223ENST00000623498 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.35□□□□□ -0.754e-6■□□□□ 9.2
SEM1-223ENST00000623498 DCAF4Q8WV16 495 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 WDR18Q9BV38 432 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 RNF26Q9BY78 433 aaPredicted RBP10.35□□□□□ -0.75
SEM1-223ENST00000623498 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 CHMP5Q9NZZ3 219 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 CSADQ9Y600 493 aa10.35□□□□□ -0.75
SEM1-223ENST00000623498 OTOFQ9HC10 1997 aa10.34□□□□□ -0.75
SEM1-223ENST00000623498 PTPDC1A2A3K4 754 aa10.34□□□□□ -0.75
SEM1-223ENST00000623498 F5H6K3 240 aa10.34□□□□□ -0.75
SEM1-223ENST00000623498 PRPF3O43395 683 aaKnown RBP10.34□□□□□ -0.75
SEM1-223ENST00000623498 FMNL1O95466 1100 aaPredicted RBP10.34□□□□□ -0.75
SEM1-223ENST00000623498 PDHBP11177 359 aa10.34□□□□□ -0.75
SEM1-223ENST00000623498 USP14P54578 494 aa10.34□□□□□ -0.75
SEM1-223ENST00000623498 FKBP1BP68106 108 aa10.34□□□□□ -0.75
SEM1-223ENST00000623498 KLRC3Q07444 240 aa10.34□□□□□ -0.75
SEM1-223ENST00000623498 TTLL12Q14166 644 aaPredicted RBP10.34□□□□□ -0.75
SEM1-223ENST00000623498 LARP1BQ659C4 914 aaKnown RBP10.34□□□□□ -0.75
SEM1-223ENST00000623498 MAP1SQ66K74 1059 aaPredicted RBP10.34□□□□□ -0.75
SEM1-223ENST00000623498 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms