RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 RARBP10826 455 aa8.39□□□□□ -1.07
CDKL5-204ENST00000623364 CD44P16070 742 aaKnown RBP8.39□□□□□ -1.07
CDKL5-204ENST00000623364 EIF4A1P60842 406 aaKnown RBP8.39□□□□□ -1.07
CDKL5-204ENST00000623364 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
CDKL5-204ENST00000623364 ERVK-24P63145 666 aa8.39□□□□□ -1.07
CDKL5-204ENST00000623364 DCLK2Q8N568 766 aa8.39□□□□□ -1.07
CDKL5-204ENST00000623364 GPR161Q8N6U8 529 aaKnown RBP8.39□□□□□ -1.07
CDKL5-204ENST00000623364 PNISRQ8TF01 805 aaKnown RBP8.39□□□□□ -1.07
CDKL5-204ENST00000623364 FAM151AQ8WW52 585 aa8.39□□□□□ -1.07
CDKL5-204ENST00000623364 TSEN34Q9BSV6 310 aaKnown RBP8.39□□□□□ -1.07
CDKL5-204ENST00000623364 CLDND1Q9NY35 253 aa8.39□□□□□ -1.07
CDKL5-204ENST00000623364 MBTPS2O43462 519 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 PEX10O60683 326 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 EIF2S2P20042 333 aaKnown RBP8.38□□□□□ -1.07
CDKL5-204ENST00000623364 ACLYP53396 1101 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 TIGD5Q53EQ6 642 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 WDR78Q5VTH9 848 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 SPRED2Q7Z698 418 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 HERC6Q8IVU3 1022 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 TEKT1Q969V4 418 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 HIPK3Q9H422 1215 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 MTUS1Q9ULD2 1270 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 LRRFIP2Q9Y608 721 aaKnown RBP8.38□□□□□ -1.07
CDKL5-204ENST00000623364 IVNS1ABPQ9Y6Y0 642 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 IGF2RP11717 2491 aa8.38□□□□□ -1.07
CDKL5-204ENST00000623364 HECTD1Q9ULT8 2610 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 PHF20L1A8MW92 1017 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 NCK2O43639 380 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 PGK1P00558 417 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 PFKMP08237 780 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 ACTN1P12814 892 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 HMGCS2P54868 508 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 HERVK_113P62684 666 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 CCNA1P78396 465 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 HDLBPQ00341 1268 aaKnown RBP8.37□□□□□ -1.07
CDKL5-204ENST00000623364 LMNB2Q03252 620 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 SMAD4Q13485 552 aaKnown RBP8.37□□□□□ -1.07
CDKL5-204ENST00000623364 NEUROD1Q13562 356 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 COL19A1Q14993 1142 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 CLUL1Q15846 466 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 PTPROQ16827 1216 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 Q3C1V9 767 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 OLFML2BQ68BL8 750 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 ASTLQ6HA08 431 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-204ENST00000623364 TMEFF1Q8IYR6 380 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 CRACR2BQ8N4Y2 399 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-204ENST00000623364 NPLOC4Q8TAT6 608 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 GTF3C2Q8WUA4 911 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-204ENST00000623364 MRPL38Q96DV4 380 aaKnown RBP8.37□□□□□ -1.07
CDKL5-204ENST00000623364 RBPJLQ9UBG7 517 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 NDUFB9Q9Y6M9 179 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 DOPEY1Q5JWR5 2465 aa8.37□□□□□ -1.07
CDKL5-204ENST00000623364 SPEF2Q9C093 1822 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 ELP1O95163 1332 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 LOC285556D6RIA3 1793 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 MOXD2PA6NHM9 499 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 LOC730098B7Z3J9 87 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 CTNND1O60716 968 aaKnown RBP8.36□□□□□ -1.07
CDKL5-204ENST00000623364 IGHA2P01877 340 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 PTPREP23469 700 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 IGHMBP2P38935 993 aaKnown RBP8.36□□□□□ -1.07
CDKL5-204ENST00000623364 CDK7P50613 346 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 CCL23P55773 120 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 SHC2P98077 582 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 SPP2Q13103 211 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 TRIM28Q13263 835 aaKnown RBP8.36□□□□□ -1.07
CDKL5-204ENST00000623364 DCTN1Q14203 1278 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 TTLL4Q14679 1199 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 ANGPT1Q15389 498 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 C15orf52Q6ZUT6 534 aaKnown RBP8.36□□□□□ -1.07
CDKL5-204ENST00000623364 ZGPATQ8N5A5 531 aaKnown RBP8.36□□□□□ -1.07
CDKL5-204ENST00000623364 PLBD2Q8NHP8 589 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 VTI1AQ96AJ9 217 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 KIF12Q96FN5 646 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 GLT1D1Q96MS3 346 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 ZDHHC15Q96MV8 337 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 TGS1Q96RS0 853 aaKnown RBP8.36□□□□□ -1.07
CDKL5-204ENST00000623364 PAGR1Q9BTK6 254 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 RALGAPA2Q2PPJ7 1873 aa8.36□□□□□ -1.07
CDKL5-204ENST00000623364 RFX7Q2KHR2 1363 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 SPTA1P02549 2419 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 EIF4E1BA6NMX2 242 aaKnown RBP8.35□□□□□ -1.07
CDKL5-204ENST00000623364 U2SURPO15042 1029 aaKnown RBP8.35□□□□□ -1.07
CDKL5-204ENST00000623364 HTATSF1O43719 755 aaKnown RBP8.35□□□□□ -1.07
CDKL5-204ENST00000623364 ERVK-21P61565 698 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 TCP10Q12799 353 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 CBX2Q14781 532 aaPredicted RBP8.35□□□□□ -1.07
CDKL5-204ENST00000623364 PTPN21Q16825 1174 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 SOWAHCQ53LP3 525 aaPredicted RBP8.35□□□□□ -1.07
CDKL5-204ENST00000623364 ZBTB33Q86T24 672 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 DPP9Q86TI2 863 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 FAM126BQ8IXS8 530 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 BANK1Q8NDB2 785 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 PHACTR3Q96KR7 559 aa8.35□□□□□ -1.07
CDKL5-204ENST00000623364 FARP1Q9Y4F1 1045 aaPredicted RBP8.35□□□□□ -1.07
CDKL5-204ENST00000623364 SALL1Q9NSC2 1324 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 ARVCFO00192 962 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 ICAM3P32942 547 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 CLCN5P51795 746 aa8.34□□□□□ -1.07
CDKL5-204ENST00000623364 GRB14Q14449 540 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms