RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 SEMA3FQ13275 785 aa6.58□□□□□ -1.36
EBF1-211ENST00000622875 ACRBPQ8NEB7 543 aa6.58□□□□□ -1.36
EBF1-211ENST00000622875 ACBD3Q9H3P7 528 aa6.58□□□□□ -1.36
EBF1-211ENST00000622875 MAST4O15021 2626 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 A0A1B0GUA9 196 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 GALR2O43603 387 aaPredicted RBP6.57□□□□□ -1.36
EBF1-211ENST00000622875 MSCO60682 206 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 BIRC2Q13490 618 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 DONSONQ9NYP3 566 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 ERICH4A6NGS2 130 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 IVLP07476 585 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 ZP2Q05996 745 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 EPHA10Q5JZY3 1008 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 FAM114A1Q8IWE2 563 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 RNF214Q8ND24 703 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 ITFG2Q969R8 447 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 TESK2Q96S53 571 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 NKX2-4Q9H2Z4 354 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 OGFRQ9NZT2 677 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 MAP1BP46821 2468 aaKnown RBP6.57□□□□□ -1.36
EBF1-211ENST00000622875 ACACBO00763 2458 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 TMEM221A6NGB7 291 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 M0R296 226 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 PRKAR2AP13861 404 aaKnown RBP6.57□□□□□ -1.36
EBF1-211ENST00000622875 FKBP1AP62942 108 aaKnown RBP6.57□□□□□ -1.36
EBF1-211ENST00000622875 CBX1P83916 185 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 LONRF3Q496Y0 759 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 SUGP1Q8IWZ8 645 aaKnown RBP6.57□□□□□ -1.36
EBF1-211ENST00000622875 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.57□□□□□ -1.36
EBF1-211ENST00000622875 LPAR1Q92633 364 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 GGA1Q9UJY5 639 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 RALYQ9UKM9 306 aaKnown RBP6.57□□□□□ -1.36
EBF1-211ENST00000622875 SMC3Q9UQE7 1217 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 DAGLAQ9Y4D2 1042 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 TACC3Q9Y6A5 838 aa6.57□□□□□ -1.36
EBF1-211ENST00000622875 STK10O94804 968 aaKnown RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 BAG4O95429 457 aaKnown RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 TMED1Q13445 227 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 TNFAIP1Q13829 316 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 CCAR1Q8IX12 1150 aaKnown RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 YBX2Q9Y2T7 364 aaKnown RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 PCDHA11Q9Y5I1 949 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 LOC102724159A0A0B4J2E5 919 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 PWP2Q15269 919 aaKnown RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 FAM110CQ1W6H9 321 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 SH3RF1Q7Z6J0 888 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 DDX12PQ92771 950 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 IPO8O15397 1037 aaKnown RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 TMEM240Q5SV17 173 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 KRBA2Q6ZNG9 492 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 NKD2Q969F2 451 aaPredicted RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 ZNF428Q96B54 188 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 RALGAPA2Q2PPJ7 1873 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 SOWAHBA6NEL2 793 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 SPDYE2BA6NHP3 402 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 SPDYE6P0CI01 402 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 SSTR3P32745 418 aaPredicted RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 RASA3Q14644 834 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 SKIV2LQ15477 1246 aaKnown RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 NOL9Q5SY16 702 aaKnown RBP6.56□□□□□ -1.36
EBF1-211ENST00000622875 TSPAN18Q96SJ8 248 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 SLC28A3Q9HAS3 691 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 ATP11BQ9Y2G3 1177 aa6.56□□□□□ -1.36
EBF1-211ENST00000622875 ZFHX2Q9C0A1 2572 aaPredicted RBP6.55□□□□□ -1.36
EBF1-211ENST00000622875 DOCK1Q14185 1865 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 ERLIN1O75477 346 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 KIAA0754O94854 1291 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 SDHBP21912 280 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 DLGAP5Q15398 846 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 CCDC152Q4G0S7 254 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.55□□□□□ -1.36
EBF1-211ENST00000622875 GOLGA6CA6NDK9 693 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 GOLGA6BA6NDN3 693 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 G3V3G9 751 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 CXCL11O14625 94 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 PRPF40AO75400 957 aaKnown RBP6.55□□□□□ -1.36
EBF1-211ENST00000622875 GOLGA6DP0CG33 693 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 CACNB2Q08289 660 aaPredicted RBP6.55□□□□□ -1.36
EBF1-211ENST00000622875 TRAF1Q13077 416 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 TRIM60Q495X7 471 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 DCAF8Q5TAQ9 597 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 KIF6Q6ZMV9 814 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 TRIM67Q6ZTA4 783 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 USP6NLQ92738 828 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 KIF2CQ99661 725 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 UBE2ZQ9H832 354 aaPredicted RBP6.55□□□□□ -1.36
EBF1-211ENST00000622875 GOLGA6AQ9NYA3 693 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 PAXBP1Q9Y5B6 917 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 UFL1O94874 794 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 CLTBP09497 229 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 NUCB2P80303 420 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 PPIGQ13427 754 aaKnown RBP eCLIP6.55□□□□□ -1.36
EBF1-211ENST00000622875 MYBPC2Q14324 1141 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 PSRC1Q6PGN9 363 aaPredicted RBP6.55□□□□□ -1.36
EBF1-211ENST00000622875 ADHFE1Q8IWW8 467 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 WDR66Q8TBY9 1149 aa6.55□□□□□ -1.36
EBF1-211ENST00000622875 CELF1Q92879 486 aaKnown RBP6.55□□□□□ -1.36
EBF1-211ENST00000622875 ZMAT2Q96NC0 199 aaKnown RBP6.55□□□□□ -1.36
EBF1-211ENST00000622875 SIP14410 1827 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms