RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 CEP104O60308 925 aa17.99■□□□□ 0.47
GABRB3-215ENST00000622697 NBPF14Q5TI25 921 aa17.99■□□□□ 0.47
GABRB3-215ENST00000622697 HAUS3Q68CZ6 603 aa17.99■□□□□ 0.47
GABRB3-215ENST00000622697 RASGRP4Q8TDF6 673 aa17.99■□□□□ 0.47
GABRB3-215ENST00000622697 IFIH1Q9BYX4 1025 aaKnown RBP17.99■□□□□ 0.47
GABRB3-215ENST00000622697 SCG2P13521 617 aa17.99■□□□□ 0.47
GABRB3-215ENST00000622697 DYNLL1P63167 89 aaKnown RBP17.99■□□□□ 0.47
GABRB3-215ENST00000622697 KIF23Q02241 960 aaPredicted RBP17.99■□□□□ 0.47
GABRB3-215ENST00000622697 KIAA1524Q8TCG1 905 aa17.99■□□□□ 0.47
GABRB3-215ENST00000622697 KIF2CQ99661 725 aa17.99■□□□□ 0.47
GABRB3-215ENST00000622697 ABCC3O15438 1527 aa17.99■□□□□ 0.47
GABRB3-215ENST00000622697 GOLGA6CA6NDK9 693 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 CIAO1O76071 339 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 GOLGA6DP0CG33 693 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 SND1Q7KZF4 910 aaKnown RBP eCLIP17.98■□□□□ 0.47
GABRB3-215ENST00000622697 FNBP4Q8N3X1 1017 aaPredicted RBP17.98■□□□□ 0.47
GABRB3-215ENST00000622697 GOLGA6AQ9NYA3 693 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 RCOR1Q9UKL0 485 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 ZDHHC9Q9Y397 364 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 LMTK3Q96Q04 1460 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 CCDC169A6NNP5 214 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 IMPG2Q9BZV3 1241 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 KCNQ4P56696 695 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 GTF2IP78347 998 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 KLHL30Q0D2K2 578 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 ARID5BQ14865 1188 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 CPSF1Q10570 1443 aaKnown RBP17.98■□□□□ 0.47
GABRB3-215ENST00000622697 OR8K1Q8NGG5 319 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 CDCA7Q9BWT1 371 aaPredicted RBP17.98■□□□□ 0.47
GABRB3-215ENST00000622697 ERBB3P21860 1342 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 IGKV5-2P06315 115 aa17.98■□□□□ 0.47
GABRB3-215ENST00000622697 LRRC47Q8N1G4 583 aaKnown RBP17.98■□□□□ 0.47
GABRB3-215ENST00000622697 TOB2Q14106 344 aaPredicted RBP17.97■□□□□ 0.47
GABRB3-215ENST00000622697 MFSD14BQ5SR56 506 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 CEP57Q86XR8 500 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 POLR3EQ9NVU0 708 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 SPOPO43791 374 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 GCNT3O95395 438 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 RDH13Q8NBN7 331 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 GPR108Q9NPR9 543 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 ADD2P35612 726 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 GABPB1Q06547 395 aaPredicted RBP17.97■□□□□ 0.47
GABRB3-215ENST00000622697 TUBB2AQ13885 445 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 MSL1Q68DK7 614 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 TUBB2BQ9BVA1 445 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.97■□□□□ 0.47
GABRB3-215ENST00000622697 NSRP1Q9H0G5 558 aaKnown RBP17.97■□□□□ 0.47
GABRB3-215ENST00000622697 SLC39A2Q9NP94 309 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 CFAP74Q9C0B2 1584 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 GOLGA6BA6NDN3 693 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 PPP1R14CQ8TAE6 165 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 NAP1L4Q99733 375 aaKnown RBP17.97■□□□□ 0.47
GABRB3-215ENST00000622697 CCDC77Q9BR77 488 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 SAR1BQ9Y6B6 198 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 KLRF2D3W0D1 207 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 CFBP00751 764 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 CDC25AP30304 524 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 CASP14P31944 242 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 GTF2A1P52655 376 aaPredicted RBP17.97■□□□□ 0.47
GABRB3-215ENST00000622697 MYCT1Q8N699 235 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 DNM3Q9UQ16 869 aa17.97■□□□□ 0.47
GABRB3-215ENST00000622697 LCORLQ8N3X6 602 aa17.96■□□□□ 0.47
GABRB3-215ENST00000622697 GPR161Q8N6U8 529 aaKnown RBP17.96■□□□□ 0.47
GABRB3-215ENST00000622697 SERPINA10Q9UK55 444 aa17.96■□□□□ 0.47
GABRB3-215ENST00000622697 CALUO43852 315 aaPredicted RBP17.96■□□□□ 0.47
GABRB3-215ENST00000622697 SPATA1Q5VX52 437 aa17.96■□□□□ 0.47
GABRB3-215ENST00000622697 CCDC26Q8TAB7 109 aa17.96■□□□□ 0.47
GABRB3-215ENST00000622697 MRPL44Q9H9J2 332 aaKnown RBP17.96■□□□□ 0.47
GABRB3-215ENST00000622697 RPN1P04843 607 aaKnown RBP17.96■□□□□ 0.47
GABRB3-215ENST00000622697 BIRC3Q13489 604 aa17.96■□□□□ 0.47
GABRB3-215ENST00000622697 DPP8Q6V1X1 898 aaPredicted RBP17.96■□□□□ 0.47
GABRB3-215ENST00000622697 MTRF1LQ9UGC7 380 aaKnown RBP17.96■□□□□ 0.47
GABRB3-215ENST00000622697 CALRP27797 417 aaKnown RBP17.96■□□□□ 0.47
GABRB3-215ENST00000622697 TTC31Q49AM3 519 aaPredicted RBP17.96■□□□□ 0.47
GABRB3-215ENST00000622697 SFMBT2Q5VUG0 894 aa17.96■□□□□ 0.47
GABRB3-215ENST00000622697 CYP2D7A0A087X1C5 515 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 VWA3BQ502W6 1294 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 ANKS4BQ8N8V4 417 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 MRRFQ96E11 262 aaKnown RBP17.95■□□□□ 0.46
GABRB3-215ENST00000622697 ZSWIM5Q9P217 1185 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 NDUFAB1O14561 156 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 BUB1O43683 1085 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 CALCOCO2Q13137 446 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 SEL1L2Q5TEA6 688 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 HECW2Q9P2P5 1572 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 CPXCR1Q8N123 301 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 ARFGAP2Q8N6H7 521 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 LZTS2Q9BRK4 669 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 PCDHB13Q9Y5F0 798 aa17.95■□□□□ 0.46
GABRB3-215ENST00000622697 SEC31AO94979 1220 aaKnown RBP17.95■□□□□ 0.46
GABRB3-215ENST00000622697 CRKLP46109 303 aaKnown RBP17.95■□□□□ 0.46
GABRB3-215ENST00000622697 FMNL1O95466 1100 aaPredicted RBP17.94■□□□□ 0.46
GABRB3-215ENST00000622697 IFT20Q8IY31 132 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 LSM14BQ9BX40 385 aaKnown RBP17.94■□□□□ 0.46
GABRB3-215ENST00000622697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.94■□□□□ 0.46
GABRB3-215ENST00000622697 TMEM94Q12767 1356 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 ARHGEF35A5YM69 484 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 ANKRD13CQ8N6S4 541 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 DNAI2Q9GZS0 605 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 IQCGQ9H095 443 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms