RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 WWC3Q9ULE0 1092 aa24.46■■□□□ 1.51
PCSK6-220ENST00000622483 PDE2AO00408 941 aaPredicted RBP24.45■■□□□ 1.5
PCSK6-220ENST00000622483 PI16Q6UXB8 463 aa24.45■■□□□ 1.5
PCSK6-220ENST00000622483 AIDAQ96BJ3 306 aa24.45■■□□□ 1.5
PCSK6-220ENST00000622483 ADD3Q9UEY8 706 aaKnown RBP24.45■■□□□ 1.5
PCSK6-220ENST00000622483 MYH8P13535 1937 aa24.45■■□□□ 1.5
PCSK6-220ENST00000622483 GRIN2DO15399 1336 aa24.45■■□□□ 1.5
PCSK6-220ENST00000622483 SYNRGQ9UMZ2 1314 aa24.45■■□□□ 1.5
PCSK6-220ENST00000622483 TRIM29Q14134 588 aa24.45■■□□□ 1.5
PCSK6-220ENST00000622483 NFXL1Q6ZNB6 911 aa24.45■■□□□ 1.5
PCSK6-220ENST00000622483 JADE2Q9NQC1 790 aa24.45■■□□□ 1.5
PCSK6-220ENST00000622483 HELLSQ9NRZ9 838 aa24.45■■□□□ 1.5
PCSK6-220ENST00000622483 EIF3HO15372 352 aaKnown RBP eCLIP24.44■■□□□ 1.5
PCSK6-220ENST00000622483 ABHD10Q9NUJ1 306 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 DUSP10Q9Y6W6 482 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 KIAA0754O94854 1291 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 HSPA1LP34931 641 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 RFX5P48382 616 aaPredicted RBP24.44■■□□□ 1.5
PCSK6-220ENST00000622483 NR5A1Q13285 461 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 N4BP2L2Q92802 583 aaPredicted RBP24.44■■□□□ 1.5
PCSK6-220ENST00000622483 CABS1Q96KC9 395 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 PCDHB6Q9Y5E3 794 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 SAR1BQ9Y6B6 198 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 GPTP24298 496 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 GUCY1A2P33402 732 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 PLCD1P51178 756 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 CCDC122Q5T0U0 273 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 CTNND2Q9UQB3 1225 aa24.44■■□□□ 1.5
PCSK6-220ENST00000622483 A0A087WZG4 1122 aa24.43■■□□□ 1.5
PCSK6-220ENST00000622483 MACROD2A1Z1Q3 448 aa24.43■■□□□ 1.5
PCSK6-220ENST00000622483 RNF113AO15541 343 aaKnown RBP24.43■■□□□ 1.5
PCSK6-220ENST00000622483 USP8P40818 1118 aa24.43■■□□□ 1.5
PCSK6-220ENST00000622483 MEX3CQ5U5Q3 659 aaKnown RBP24.43■■□□□ 1.5
PCSK6-220ENST00000622483 MSL3Q8N5Y2 521 aaKnown RBP24.43■■□□□ 1.5
PCSK6-220ENST00000622483 COPRSQ9NQ92 184 aa24.43■■□□□ 1.5
PCSK6-220ENST00000622483 REXO2Q9Y3B8 237 aaKnown RBP24.43■■□□□ 1.5
PCSK6-220ENST00000622483 EPSTI1Q96J88 318 aa24.43■■□□□ 1.5
PCSK6-220ENST00000622483 FOXP2O15409 715 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 RDXP35241 583 aaKnown RBP24.42■■□□□ 1.5
PCSK6-220ENST00000622483 FILIP1LQ4L180 1135 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 RPAINQ86UA6 219 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 CNGA4Q8IV77 575 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 JAKMIP2Q96AA8 810 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 DACH1Q9UI36 760 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 CCDC196A0A1B0GTZ2 297 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 HOXB7P09629 217 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 APBA1Q02410 837 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 DPYDQ12882 1025 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 PPFIA1Q13136 1202 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 MB21D2Q8IYB1 491 aaPredicted RBP24.42■■□□□ 1.5
PCSK6-220ENST00000622483 SYNE4Q8N205 404 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 BLZF1Q9H2G9 400 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 VIPAS39Q9H9C1 493 aa24.42■■□□□ 1.5
PCSK6-220ENST00000622483 SHOX2O60902 331 aaPredicted RBP24.41■■□□□ 1.5
PCSK6-220ENST00000622483 ATP2C2O75185 946 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 SLC4A9Q96Q91 983 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 NAA15Q9BXJ9 866 aaKnown RBP24.41■■□□□ 1.5
PCSK6-220ENST00000622483 PUS7LQ9H0K6 701 aaKnown RBP24.41■■□□□ 1.5
PCSK6-220ENST00000622483 EHD2Q9NZN4 543 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 LRRC37A3O60309 1634 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 GUCY1A3Q02108 690 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 LRRC24Q50LG9 513 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 TRAPPC11Q7Z392 1133 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 NCOA7Q8NI08 942 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 DMGDHQ9UI17 866 aaKnown RBP24.41■■□□□ 1.5
PCSK6-220ENST00000622483 KRT14P02533 472 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 TOB1P50616 345 aaPredicted RBP24.41■■□□□ 1.5
PCSK6-220ENST00000622483 SEC24CP53992 1094 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 SF3A3Q12874 501 aaKnown RBP eCLIP24.41■■□□□ 1.56e-7■■■□□ 16.6
PCSK6-220ENST00000622483 MARCH10Q8NA82 808 aaPredicted RBP24.41■■□□□ 1.5
PCSK6-220ENST00000622483 TBC1D2BQ9UPU7 963 aa24.41■■□□□ 1.5
PCSK6-220ENST00000622483 RANBP6O60518 1105 aaKnown RBP24.4■■□□□ 1.5
PCSK6-220ENST00000622483 IARSP41252 1262 aaKnown RBP24.4■■□□□ 1.5
PCSK6-220ENST00000622483 CCNI2Q6ZMN8 369 aaPredicted RBP24.4■■□□□ 1.5
PCSK6-220ENST00000622483 ZKSCAN4Q969J2 545 aaPredicted RBP24.4■■□□□ 1.5
PCSK6-220ENST00000622483 CSRNP2Q9H175 543 aa24.4■■□□□ 1.5
PCSK6-220ENST00000622483 A0A087X0B3 334 aa24.4■■□□□ 1.5
PCSK6-220ENST00000622483 PAX7P23759 505 aa24.4■■□□□ 1.5
PCSK6-220ENST00000622483 CXCR5P32302 372 aa24.4■■□□□ 1.5
PCSK6-220ENST00000622483 CYB5R4Q7L1T6 521 aa24.4■■□□□ 1.5
PCSK6-220ENST00000622483 CNPY4Q8N129 248 aa24.4■■□□□ 1.5
PCSK6-220ENST00000622483 SMCR8Q8TEV9 937 aaPredicted RBP24.4■■□□□ 1.5
PCSK6-220ENST00000622483 EPN1Q9Y6I3 576 aaPredicted RBP24.4■■□□□ 1.5
PCSK6-220ENST00000622483 ZMYM6O95789 1325 aa24.4■■□□□ 1.5
PCSK6-220ENST00000622483 B4E1Z4 1266 aa24.39■■□□□ 1.5
PCSK6-220ENST00000622483 ZNF213O14771 459 aa24.39■■□□□ 1.5
PCSK6-220ENST00000622483 MYO1BO43795 1136 aa24.39■■□□□ 1.5
PCSK6-220ENST00000622483 POTEDQ86YR6 584 aa24.39■■□□□ 1.5
PCSK6-220ENST00000622483 PRPF38AQ8NAV1 312 aaKnown RBP24.39■■□□□ 1.5
PCSK6-220ENST00000622483 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.39■■□□□ 1.5
PCSK6-220ENST00000622483 E2F5Q15329 346 aa24.39■■□□□ 1.5
PCSK6-220ENST00000622483 SPATA1Q5VX52 437 aa24.39■■□□□ 1.5
PCSK6-220ENST00000622483 TMTC1Q8IUR5 882 aa24.39■■□□□ 1.5
PCSK6-220ENST00000622483 SKAP2O75563 359 aaPredicted RBP24.39■■□□□ 1.49
PCSK6-220ENST00000622483 NEBLO76041 1014 aa24.39■■□□□ 1.49
PCSK6-220ENST00000622483 KRT31Q15323 416 aa24.39■■□□□ 1.49
PCSK6-220ENST00000622483 CYP26C1Q6V0L0 522 aa24.39■■□□□ 1.49
PCSK6-220ENST00000622483 TSEN2Q8NCE0 465 aaKnown RBP24.39■■□□□ 1.49
PCSK6-220ENST00000622483 FAM205CA6NFA0 338 aa24.38■■□□□ 1.49
PCSK6-220ENST00000622483 NDUFA10O95299 355 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms