RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 EIF4A2Q14240 407 aaKnown RBP8.85□□□□□ -0.99
VPS11-209ENST00000622309 HSP90AA4PQ58FG1 418 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 RRP12Q5JTH9 1297 aaKnown RBP8.85□□□□□ -0.99
VPS11-209ENST00000622309 CREB3L3Q68CJ9 461 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 ARHGAP27Q6ZUM4 889 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 CUL5Q93034 780 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 C8orf37Q96NL8 207 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 EPAS1Q99814 870 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 C15orf41Q9Y2V0 281 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 RBM8AQ9Y5S9 174 aaKnown RBP8.85□□□□□ -0.99
VPS11-209ENST00000622309 TARSL2A2RTX5 802 aaKnown RBP8.85□□□□□ -0.99
VPS11-209ENST00000622309 CDC25CP30307 473 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 TBX2Q13207 712 aaPredicted RBP8.85□□□□□ -0.99
VPS11-209ENST00000622309 STK38Q15208 465 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 ADALQ6DHV7 355 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 NLRP14Q86W24 1093 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 PPFIBP1Q86W92 1011 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 RBM12BQ8IXT5 1001 aaKnown RBP8.85□□□□□ -0.99
VPS11-209ENST00000622309 TRIM4Q9C037 500 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 PCDHA7Q9UN72 937 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 TTF2Q9UNY4 1162 aaKnown RBP8.85□□□□□ -0.99
VPS11-209ENST00000622309 PCDHGA4Q9Y5G9 962 aa8.85□□□□□ -0.99
VPS11-209ENST00000622309 SPDYE3A6NKU9 549 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 E7EVH7 732 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 ANP32DO95626 131 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 HDLBPQ00341 1268 aaKnown RBP8.84□□□□□ -0.99
VPS11-209ENST00000622309 CCNI2Q6ZMN8 369 aaPredicted RBP8.84□□□□□ -0.99
VPS11-209ENST00000622309 CAGE1Q8TC20 777 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 TMEM165Q9HC07 324 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 ARHGEF10LQ9HCE6 1279 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 BLOC1S6Q9UL45 172 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 FAM184BQ9ULE4 1060 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 PTPRUQ92729 1446 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 KIF20BQ96Q89 1820 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 PNMA6EA0A0J9YXQ4 647 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 F6X3S4 739 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 ATP6V1G2O95670 118 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 ADD1P35611 737 aaKnown RBP8.84□□□□□ -0.99
VPS11-209ENST00000622309 GCLCP48506 637 aaPredicted RBP8.84□□□□□ -0.99
VPS11-209ENST00000622309 ATP8B2P98198 1209 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 CLEC4GQ6UXB4 293 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 EHBP1Q8NDI1 1231 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 MYCBPAPQ8TBZ2 947 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 PLEKHG4BQ96PX9 1271 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 RTEL1Q9NZ71 1219 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 DLC1Q96QB1 1528 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 OPLAHO14841 1288 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 FOXO3O43524 673 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 PPP1R37O75864 691 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 SLC4A2P04920 1241 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 BDNFP23560 247 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 GUCY1A3Q02108 690 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 NECTIN1Q15223 517 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 KCTD16Q68DU8 428 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 NOC3LQ8WTT2 800 aaKnown RBP8.84□□□□□ -0.99
VPS11-209ENST00000622309 NUP58Q9BVL2 599 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 CDCA7Q9BWT1 371 aaPredicted RBP8.84□□□□□ -0.99
VPS11-209ENST00000622309 NAA15Q9BXJ9 866 aaKnown RBP8.84□□□□□ -0.99
VPS11-209ENST00000622309 EBF2Q9HAK2 575 aa8.84□□□□□ -0.99
VPS11-209ENST00000622309 NHSL1Q5SYE7 1610 aa8.83□□□□□ -1
VPS11-209ENST00000622309 A0A1W2PQ27 194 aa8.83□□□□□ -1
VPS11-209ENST00000622309 A0A1W2PQ64 194 aa8.83□□□□□ -1
VPS11-209ENST00000622309 A0A1W2PQD8 194 aa8.83□□□□□ -1
VPS11-209ENST00000622309 RPS6KB1P23443 525 aa8.83□□□□□ -1
VPS11-209ENST00000622309 SEC24CP53992 1094 aa8.83□□□□□ -1
VPS11-209ENST00000622309 CKAP4Q07065 602 aaKnown RBP8.83□□□□□ -1
VPS11-209ENST00000622309 PTGISQ16647 500 aa8.83□□□□□ -1
VPS11-209ENST00000622309 HIBCHQ6NVY1 386 aaPredicted RBP8.83□□□□□ -1
VPS11-209ENST00000622309 CCDC170Q8IYT3 715 aa8.83□□□□□ -1
VPS11-209ENST00000622309 CCHCR1Q8TD31 782 aa8.83□□□□□ -1
VPS11-209ENST00000622309 CPLX3Q8WVH0 158 aa8.83□□□□□ -1
VPS11-209ENST00000622309 ARL8AQ96BM9 186 aa8.83□□□□□ -1
VPS11-209ENST00000622309 ACSBG1Q96GR2 724 aa8.83□□□□□ -1
VPS11-209ENST00000622309 HSD3B7Q9H2F3 369 aa8.83□□□□□ -1
VPS11-209ENST00000622309 NOP53Q9NZM5 478 aaKnown RBP8.83□□□□□ -1
VPS11-209ENST00000622309 A0A0U1RQJ8 604 aa8.83□□□□□ -1
VPS11-209ENST00000622309 MGRN1O60291 552 aa8.83□□□□□ -1
VPS11-209ENST00000622309 LUC7L3O95232 432 aaKnown RBP8.83□□□□□ -1
VPS11-209ENST00000622309 FAM107AO95990 144 aa8.83□□□□□ -1
VPS11-209ENST00000622309 NLRP6P59044 892 aa8.83□□□□□ -1
VPS11-209ENST00000622309 CCDC15Q0P6D6 951 aa8.83□□□□□ -1
VPS11-209ENST00000622309 NNTQ13423 1086 aa8.83□□□□□ -1
VPS11-209ENST00000622309 CUL3Q13618 768 aa8.83□□□□□ -1
VPS11-209ENST00000622309 PPP1R7Q15435 360 aa8.83□□□□□ -1
VPS11-209ENST00000622309 NBPF14Q5TI25 921 aa8.83□□□□□ -1
VPS11-209ENST00000622309 NAA16Q6N069 864 aaPredicted RBP8.83□□□□□ -1
VPS11-209ENST00000622309 RAD9BQ6WBX8 426 aa8.83□□□□□ -1
VPS11-209ENST00000622309 TRIML1Q8N9V2 468 aa8.83□□□□□ -1
VPS11-209ENST00000622309 TBC1D5Q92609 795 aa8.83□□□□□ -1
VPS11-209ENST00000622309 RPGRIP1Q96KN7 1286 aa8.83□□□□□ -1
VPS11-209ENST00000622309 PANX2Q96RD6 677 aa8.83□□□□□ -1
VPS11-209ENST00000622309 MYO1AQ9UBC5 1043 aa8.83□□□□□ -1
VPS11-209ENST00000622309 TRPC5Q9UL62 973 aaPredicted RBP8.83□□□□□ -1
VPS11-209ENST00000622309 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.83□□□□□ -1
VPS11-209ENST00000622309 ZSCAN9O15535 394 aaPredicted RBP8.82□□□□□ -1
VPS11-209ENST00000622309 KCNA1Q09470 495 aa8.82□□□□□ -1
VPS11-209ENST00000622309 ANKRD20A8PQ5CZ79 823 aa8.82□□□□□ -1
VPS11-209ENST00000622309 ALS2CLQ60I27 953 aa8.82□□□□□ -1
VPS11-209ENST00000622309 Q6ZUG5 572 aa8.82□□□□□ -1
VPS11-209ENST00000622309 SH2D3CQ8N5H7 860 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms