RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 GPR142Q7Z601 462 aa25.24■■□□□ 1.63
PMPCA-212ENST00000622209 PLEKHH3Q7Z736 793 aa25.24■■□□□ 1.63
PMPCA-212ENST00000622209 RBM27Q9P2N5 1060 aaKnown RBP25.24■■□□□ 1.63
PMPCA-212ENST00000622209 PRKAB2O43741 272 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 CNMDO75829 334 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 PRKAR2AP13861 404 aaKnown RBP25.23■■□□□ 1.63
PMPCA-212ENST00000622209 ERICH6BQ5W0A0 696 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 NECAB2Q7Z6G3 386 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 RILPL2Q969X0 211 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 DDRGK1Q96HY6 314 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 CCDC136Q96JN2 1154 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 RABGAP1Q9Y3P9 1069 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 SLC4A4Q9Y6R1 1079 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 DOCK3Q8IZD9 2030 aa25.23■■□□□ 1.63
PMPCA-212ENST00000622209 XRCC5P13010 732 aaKnown RBP25.22■■□□□ 1.63
PMPCA-212ENST00000622209 ZKSCAN1P17029 563 aaPredicted RBP25.22■■□□□ 1.63
PMPCA-212ENST00000622209 GNAT2P19087 354 aa25.22■■□□□ 1.63
PMPCA-212ENST00000622209 MORN1Q5T089 497 aa25.22■■□□□ 1.63
PMPCA-212ENST00000622209 USP6NLQ92738 828 aa25.22■■□□□ 1.63
PMPCA-212ENST00000622209 GPAA1O43292 621 aa25.21■■□□□ 1.63
PMPCA-212ENST00000622209 RGS2P41220 211 aa25.21■■□□□ 1.63
PMPCA-212ENST00000622209 CCL14Q16627 93 aa25.21■■□□□ 1.63
PMPCA-212ENST00000622209 WDR78Q5VTH9 848 aa25.21■■□□□ 1.63
PMPCA-212ENST00000622209 SLC44A5Q8NCS7 719 aa25.21■■□□□ 1.63
PMPCA-212ENST00000622209 DYNLL2Q96FJ2 89 aa25.21■■□□□ 1.63
PMPCA-212ENST00000622209 RPAP3Q9H6T3 665 aaPredicted RBP25.21■■□□□ 1.63
PMPCA-212ENST00000622209 MYH1P12882 1939 aa25.2■■□□□ 1.62
PMPCA-212ENST00000622209 M0R2C6 588 aa25.2■■□□□ 1.62
PMPCA-212ENST00000622209 MAP3K21Q5TCX8 1036 aa25.2■■□□□ 1.62
PMPCA-212ENST00000622209 GIMAP6Q6P9H5 292 aa25.2■■□□□ 1.62
PMPCA-212ENST00000622209 HELLSQ9NRZ9 838 aa25.2■■□□□ 1.62
PMPCA-212ENST00000622209 TRIOBPQ9H2D6 2365 aa25.19■■□□□ 1.62
PMPCA-212ENST00000622209 RANBP2P49792 3224 aaKnown RBP25.19■■□□□ 1.62
PMPCA-212ENST00000622209 A0A1W2PRG0 241 aa25.19■■□□□ 1.62
PMPCA-212ENST00000622209 CCNA1P78396 465 aa25.19■■□□□ 1.62
PMPCA-212ENST00000622209 CACNB2Q08289 660 aaPredicted RBP25.19■■□□□ 1.62
PMPCA-212ENST00000622209 TRMT44Q8IYL2 757 aaKnown RBP25.19■■□□□ 1.62
PMPCA-212ENST00000622209 ANKLE1Q8NAG6 615 aa25.19■■□□□ 1.62
PMPCA-212ENST00000622209 SEC62Q99442 399 aaKnown RBP25.19■■□□□ 1.62
PMPCA-212ENST00000622209 BTBD7Q9P203 1132 aa25.19■■□□□ 1.62
PMPCA-212ENST00000622209 TTC22Q5TAA0 569 aa25.18■■□□□ 1.62
PMPCA-212ENST00000622209 AMOTL1Q8IY63 956 aa25.18■■□□□ 1.62
PMPCA-212ENST00000622209 NAV1Q8NEY1 1877 aa25.17■■□□□ 1.62
PMPCA-212ENST00000622209 SPDYE16A6NNV3 312 aaPredicted RBP25.17■■□□□ 1.62
PMPCA-212ENST00000622209 GSG1L2A8MUP6 293 aa25.17■■□□□ 1.62
PMPCA-212ENST00000622209 PATL2C9JE40 543 aaKnown RBP25.17■■□□□ 1.62
PMPCA-212ENST00000622209 MNX1P50219 401 aaPredicted RBP25.17■■□□□ 1.62
PMPCA-212ENST00000622209 MAP2K5Q13163 448 aa25.17■■□□□ 1.62
PMPCA-212ENST00000622209 APBA2Q99767 749 aa25.17■■□□□ 1.62
PMPCA-212ENST00000622209 NBPF3Q9H094 633 aa25.17■■□□□ 1.62
PMPCA-212ENST00000622209 OGDHLQ9ULD0 1010 aa25.17■■□□□ 1.62
PMPCA-212ENST00000622209 DDX60LQ5H9U9 1706 aaKnown RBP25.17■■□□□ 1.62
PMPCA-212ENST00000622209 CYP2D7A0A087X1C5 515 aa25.16■■□□□ 1.62
PMPCA-212ENST00000622209 SMIM22K7EJ46 135 aa25.16■■□□□ 1.62
PMPCA-212ENST00000622209 SDSP20132 328 aa25.16■■□□□ 1.62
PMPCA-212ENST00000622209 CCND3P30281 292 aaPredicted RBP25.16■■□□□ 1.62
PMPCA-212ENST00000622209 PRO3102Q9H379 93 aa25.16■■□□□ 1.62
PMPCA-212ENST00000622209 SWAP70Q9UH65 585 aa25.16■■□□□ 1.62
PMPCA-212ENST00000622209 USP17L12C9JPN9 530 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 USP17L21D6R901 530 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 HIP1O00291 1037 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 AKR1B1P15121 316 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 PTPREP23469 700 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 MCMDC2Q4G0Z9 681 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 SBK1Q52WX2 424 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 C12orf60Q5U649 245 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 LBX2Q6XYB7 198 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 TMEM179Q6ZVK1 233 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 CLEC10AQ8IUN9 316 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 C7orf61Q8IZ16 206 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 TANGO6Q9C0B7 1094 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 C11orf49Q9H6J7 331 aa25.15■■□□□ 1.62
PMPCA-212ENST00000622209 ARPP21Q9UBL0 812 aaPredicted RBP25.15■■□□□ 1.62
PMPCA-212ENST00000622209 SLC15A5A6NIM6 579 aa25.14■■□□□ 1.62
PMPCA-212ENST00000622209 GSPT1P15170 499 aaKnown RBP25.14■■□□□ 1.62
PMPCA-212ENST00000622209 COG2Q14746 738 aa25.14■■□□□ 1.62
PMPCA-212ENST00000622209 KIAA1755Q5JYT7 1200 aa25.14■■□□□ 1.62
PMPCA-212ENST00000622209 CTR9Q6PD62 1173 aa25.14■■□□□ 1.62
PMPCA-212ENST00000622209 NACAP1Q9BZK3 213 aa25.14■■□□□ 1.62
PMPCA-212ENST00000622209 FLRT1Q9NZU1 646 aa25.14■■□□□ 1.62
PMPCA-212ENST00000622209 IVNS1ABPQ9Y6Y0 642 aa25.14■■□□□ 1.62
PMPCA-212ENST00000622209 PLXNB2O15031 1838 aa25.14■■□□□ 1.61
PMPCA-212ENST00000622209 APPP05067 770 aa25.13■■□□□ 1.61
PMPCA-212ENST00000622209 SIAH1Q8IUQ4 282 aa25.13■■□□□ 1.61
PMPCA-212ENST00000622209 FAM227BQ96M60 508 aa25.13■■□□□ 1.61
PMPCA-212ENST00000622209 HOXC10Q9NYD6 342 aa25.13■■□□□ 1.61
PMPCA-212ENST00000622209 A0A0D9SFI3 127 aa25.12■■□□□ 1.61
PMPCA-212ENST00000622209 CDK8P49336 464 aa25.12■■□□□ 1.61
PMPCA-212ENST00000622209 NMIQ13287 307 aaPredicted RBP25.12■■□□□ 1.61
PMPCA-212ENST00000622209 MFSD14CQ5VZR4 134 aa25.12■■□□□ 1.61
PMPCA-212ENST00000622209 LHX8Q68G74 356 aa25.12■■□□□ 1.61
PMPCA-212ENST00000622209 IFNL3Q8IZI9 196 aa25.12■■□□□ 1.61
PMPCA-212ENST00000622209 SPICE1Q8N0Z3 855 aa25.12■■□□□ 1.61
PMPCA-212ENST00000622209 PPP4R2Q9NY27 417 aa25.12■■□□□ 1.61
PMPCA-212ENST00000622209 ZMYND8Q9ULU4 1186 aaPredicted RBP25.12■■□□□ 1.61
PMPCA-212ENST00000622209 ATP2B2Q01814 1243 aa25.11■■□□□ 1.61
PMPCA-212ENST00000622209 CCDC129Q6ZRS4 1044 aa25.11■■□□□ 1.61
PMPCA-212ENST00000622209 ARHGEF10LQ9HCE6 1279 aa25.11■■□□□ 1.61
PMPCA-212ENST00000622209 EPB41L4AQ9HCS5 686 aaPredicted RBP25.11■■□□□ 1.61
PMPCA-212ENST00000622209 DIAPH3Q9NSV4 1193 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms