RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 ADCY3O60266 1144 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 SLITRK5O94991 958 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 EPHX1P07099 455 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 RNF4P78317 190 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 ANKRD39Q53RE8 183 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 NBPF12Q5TAG4 269 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-213ENST00000622183 HEATR6Q6AI08 1181 aaKnown RBP7.14□□□□□ -1.27
CPNE3-213ENST00000622183 SEZ6L2Q6UXD5 910 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 ZBTB38Q8NAP3 1195 aaPredicted RBP7.14□□□□□ -1.27
CPNE3-213ENST00000622183 ZSWIM2Q8NEG5 633 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 UTP4Q969X6 686 aaKnown RBP7.14□□□□□ -1.27
CPNE3-213ENST00000622183 KREMEN1Q96MU8 473 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 APBA2Q99767 749 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 MIPEPQ99797 713 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 PRDM10Q9NQV6 1147 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 FAM86C1Q9NVL1 165 aa7.14□□□□□ -1.27
CPNE3-213ENST00000622183 DYNC1LI2O43237 492 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-213ENST00000622183 FAM153BP0C7A2 387 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 BMP3P12645 472 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 MAP4P27816 1152 aaKnown RBP7.13□□□□□ -1.27
CPNE3-213ENST00000622183 ETV3P41162 512 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 TMEM67Q5HYA8 995 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 ZC3H12BQ5HYM0 836 aaKnown RBP7.13□□□□□ -1.27
CPNE3-213ENST00000622183 DCAF15Q66K64 600 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 TXNRD3Q86VQ6 643 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 CCDC144CPQ8IYA2 1237 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 SYNPOQ8N3V7 929 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 VWCEQ96DN2 955 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 ZNF512BQ96KM6 892 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-213ENST00000622183 SLC26A8Q96RN1 970 aa7.13□□□□□ -1.27
CPNE3-213ENST00000622183 MKRN2Q9H000 416 aaKnown RBP7.13□□□□□ -1.27
CPNE3-213ENST00000622183 SLKQ9H2G2 1235 aaPredicted RBP7.13□□□□□ -1.27
CPNE3-213ENST00000622183 INSM1Q01101 510 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-213ENST00000622183 SV2CQ496J9 727 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 RNF187Q5TA31 235 aaPredicted RBP7.12□□□□□ -1.27
CPNE3-213ENST00000622183 FAM20CQ8IXL6 584 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 ARMC10Q8N2F6 343 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 RIN3Q8TB24 985 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 RNF141Q8WVD5 230 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 MEGF10Q96KG7 1140 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 FBXL18Q96ME1 805 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 FEZ1Q99689 392 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 ASPNQ9BXN1 380 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 GBP3Q9H0R5 595 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 TMX1Q9H3N1 280 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 LGR6Q9HBX8 967 aa7.12□□□□□ -1.27
CPNE3-213ENST00000622183 FAM95CA0A1B0GW59 222 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 A0A1W2PQU0 124 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 SHOXO15266 292 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 PPM1GO15355 546 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-213ENST00000622183 RXRBP28702 533 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 AUHQ13825 339 aaKnown RBP7.11□□□□□ -1.27
CPNE3-213ENST00000622183 CDH24Q86UP0 819 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 ANKRD13AQ8IZ07 590 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 C7orf61Q8IZ16 206 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 ZNF513Q8N8E2 541 aaPredicted RBP7.11□□□□□ -1.27
CPNE3-213ENST00000622183 C1GALT1Q9NS00 363 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 WHRNQ9P202 907 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 APEX2Q9UBZ4 518 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 PRKAB1Q9Y478 270 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 ZNF451Q9Y4E5 1061 aa7.11□□□□□ -1.27
CPNE3-213ENST00000622183 CD247P20963 164 aa7.1□□□□□ -1.27
CPNE3-213ENST00000622183 CDK5R2Q13319 367 aa7.1□□□□□ -1.27
CPNE3-213ENST00000622183 TCEA2Q15560 299 aa7.1□□□□□ -1.27
CPNE3-213ENST00000622183 TAF7LQ5H9L4 462 aa7.1□□□□□ -1.27
CPNE3-213ENST00000622183 ZNF227Q86WZ6 799 aa7.1□□□□□ -1.27
CPNE3-213ENST00000622183 FGD4Q96M96 766 aa7.1□□□□□ -1.27
CPNE3-213ENST00000622183 CWC22Q9HCG8 908 aaKnown RBP7.1□□□□□ -1.27
CPNE3-213ENST00000622183 ARHGEF4Q9NR80 690 aa7.1□□□□□ -1.27
CPNE3-213ENST00000622183 CCDC163A0A0D9SF12 145 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 DHX15O43143 795 aaKnown RBP7.09□□□□□ -1.27
CPNE3-213ENST00000622183 PPM1BO75688 479 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 EOMESO95936 686 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 ITGAVP06756 1048 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 CYP7A1P22680 504 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 GYS2P54840 703 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 TKFCQ3LXA3 575 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 PAOXQ6QHF9 649 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 TOP6BLQ8N6T0 577 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 DUSP23Q9BVJ7 150 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
CPNE3-213ENST00000622183 GP6Q9HCN6 339 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 LRP2BPQ9P2M1 347 aa7.09□□□□□ -1.27
CPNE3-213ENST00000622183 A0A087WZG4 1122 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 ASMTLO95671 621 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 CAPNS1P04632 268 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 ITGA4P13612 1032 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 HSP90AA2PQ14568 343 aaPredicted RBP7.08□□□□□ -1.28
CPNE3-213ENST00000622183 NBPF9Q3BBW0 867 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 BEND4Q6ZU67 534 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 ADAT2Q7Z6V5 191 aaKnown RBP7.08□□□□□ -1.28
CPNE3-213ENST00000622183 LRRN4CLQ8ND94 238 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 BVESQ8NE79 360 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 RCC1LQ96I51 464 aaKnown RBP7.08□□□□□ -1.28
CPNE3-213ENST00000622183 COX4I2Q96KJ9 171 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 BRINP2Q9C0B6 783 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 KCNF1Q9H3M0 494 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 PCDHB12Q9Y5F1 795 aa7.08□□□□□ -1.28
CPNE3-213ENST00000622183 TRAV20A0A0B4J274 112 aa7.07□□□□□ -1.28
CPNE3-213ENST00000622183 PPP1R12AO14974 1030 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms