RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 DRC7Q8IY82 874 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 PDILTQ8N807 584 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 CCDC47Q96A33 483 aaKnown RBP14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 NUP88Q99567 741 aaPredicted RBP14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 EHMT1Q9H9B1 1298 aa14.34□□□□□ -0.11
SCAMP1-207ENST00000621999 BECN2A8MW95 431 aa14.33□□□□□ -0.11
SCAMP1-207ENST00000621999 PLEKHA8P1O95397 391 aa14.33□□□□□ -0.11
SCAMP1-207ENST00000621999 CHMP4BP1P59074 171 aa14.33□□□□□ -0.11
SCAMP1-207ENST00000621999 EXOSC10Q01780 885 aaKnown RBP14.33□□□□□ -0.11
SCAMP1-207ENST00000621999 GPATCH4Q5T3I0 446 aaKnown RBP14.33□□□□□ -0.11
SCAMP1-207ENST00000621999 C16orf86Q6ZW13 317 aa14.33□□□□□ -0.11
SCAMP1-207ENST00000621999 NSUN7Q8NE18 718 aaKnown RBP14.33□□□□□ -0.11
SCAMP1-207ENST00000621999 AIFM3Q96NN9 605 aa14.33□□□□□ -0.11
SCAMP1-207ENST00000621999 SENP2Q9HC62 589 aa14.33□□□□□ -0.11
SCAMP1-207ENST00000621999 TPD52L1Q16890 204 aaPredicted RBP14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 ZHX3Q9H4I2 956 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 ABT1Q9ULW3 272 aaKnown RBP14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 KRT18P05783 430 aaKnown RBP14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 SLURP2P0DP57 97 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 ALAS1P13196 640 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 MCM7P33993 719 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 SNAP25P60880 206 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 LETM2Q2VYF4 491 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 GOLGA6L3A6NEY3 463 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 ANTXR2P58335 489 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 RHBDL3P58872 404 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 CAMK4Q16566 473 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 TRIM44Q96DX7 344 aaPredicted RBP14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 UIMC1Q96RL1 719 aa14.33□□□□□ -0.12
SCAMP1-207ENST00000621999 SMCO2A6NFE2 343 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 SCG2P13521 617 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 NBPF12Q5TAG4 269 aaPredicted RBP14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 C2orf69Q8N8R5 385 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 PIGSQ96S52 555 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 GPBP1L1Q9HC44 474 aaPredicted RBP14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 F5H6K3 240 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 KLRC3Q07444 240 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 ASPRV1Q53RT3 343 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 C7orf43Q8WVR3 580 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 OTUD5Q96G74 571 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 KCNA3P22001 575 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 PTGER2P43116 358 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 ZNF174Q15697 407 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 RRAGCQ9HB90 399 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 GPRC5DQ9NZD1 345 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 PCDHA1Q9Y5I3 950 aa14.32□□□□□ -0.12
SCAMP1-207ENST00000621999 PES1O00541 588 aaKnown RBP14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 MAP1SQ66K74 1059 aaPredicted RBP14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 IGDCC4Q8TDY8 1250 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 GJB4Q9NTQ9 266 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 FKBP1AP62942 108 aaKnown RBP14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 FSIP1Q8NA03 581 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 TNMDQ9H2S6 317 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 MTMR4Q9NYA4 1195 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 BIN2Q9UBW5 565 aaPredicted RBP14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 ZNF541Q9H0D2 1346 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 BTBD18B2RXH4 712 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 VEGFAP15692 232 aaPredicted RBP14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 FBXO11Q86XK2 927 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 GAKO14976 1311 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 IFNAR1P17181 557 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 ADCY7P51828 1080 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 TMEM266Q2M3C6 531 aa14.31□□□□□ -0.12
SCAMP1-207ENST00000621999 CDC27P30260 824 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 USP14P54578 494 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 EVX2Q03828 476 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 CUL4AQ13619 759 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 FAM83BQ5T0W9 1011 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 RNF214Q8ND24 703 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 COA7Q96BR5 231 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 CHAMP1Q96JM3 812 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 SAMM50Q9Y512 469 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 STAT2P52630 851 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 TPM4P67936 248 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 BRAPQ7Z569 592 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 ZKSCAN4Q969J2 545 aaPredicted RBP14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 ANAPC4Q9UJX5 808 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 FZD1Q9UP38 647 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 USP17L10C9JJH3 530 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 ELP3Q9H9T3 547 aa14.3□□□□□ -0.12
SCAMP1-207ENST00000621999 GOLGA6L19H0YKK7 550 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 UBA7P41226 1012 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 RNF26Q9BY78 433 aaPredicted RBP14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 RAB34Q9BZG1 259 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 TCP11L1Q9NUJ3 509 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 REXO1Q8N1G1 1221 aaKnown RBP14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 STAG2Q8N3U4 1231 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 PKD2L1Q9P0L9 805 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 PAPPAQ13219 1627 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 FBXO18Q8NFZ0 1043 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 TRPM4Q8TD43 1214 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 PSTPIP2Q9H939 334 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 FAM198AQ9UFP1 575 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 ZBTB21Q9ULJ3 1066 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 SPTLC2O15270 562 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 ZNF384Q8TF68 577 aa14.29□□□□□ -0.12
SCAMP1-207ENST00000621999 CCPG1Q9ULG6 757 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms