RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 CREG2Q8IUH2 290 aa7.61□□□□□ -1.19
BRCA1-229ENST00000621897 FAM168AQ92567 244 aa7.61□□□□□ -1.19
BRCA1-229ENST00000621897 ASPNQ9BXN1 380 aa7.61□□□□□ -1.19
BRCA1-229ENST00000621897 CNNM2Q9H8M5 875 aa7.61□□□□□ -1.19
BRCA1-229ENST00000621897 KIAA1522Q9P206 1035 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-229ENST00000621897 KCNH3Q9ULD8 1083 aa7.61□□□□□ -1.19
BRCA1-229ENST00000621897 DNAJC25-GNG10A0A024R161 153 aa7.6□□□□□ -1.19
BRCA1-229ENST00000621897 ZNF165P49910 485 aa7.6□□□□□ -1.19
BRCA1-229ENST00000621897 RALGPS1Q5JS13 557 aa7.6□□□□□ -1.19
BRCA1-229ENST00000621897 FYB2Q5VWT5 728 aa7.6□□□□□ -1.19
BRCA1-229ENST00000621897 OGFOD2Q6N063 350 aa7.6□□□□□ -1.19
BRCA1-229ENST00000621897 TMPRSS7Q7RTY8 843 aa7.6□□□□□ -1.19
BRCA1-229ENST00000621897 TSPYL5Q86VY4 417 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-229ENST00000621897 RGS22Q8NE09 1264 aa7.6□□□□□ -1.19
BRCA1-229ENST00000621897 MRRFQ96E11 262 aaKnown RBP7.6□□□□□ -1.19
BRCA1-229ENST00000621897 ALPK1Q96QP1 1244 aa7.6□□□□□ -1.19
BRCA1-229ENST00000621897 SLAMF8Q9P0V8 285 aa7.6□□□□□ -1.19
BRCA1-229ENST00000621897 DDX41Q9UJV9 622 aaKnown RBP7.6□□□□□ -1.19
BRCA1-229ENST00000621897 SCAMP3O14828 347 aaKnown RBP7.59□□□□□ -1.19
BRCA1-229ENST00000621897 TXKP42681 527 aa7.59□□□□□ -1.19
BRCA1-229ENST00000621897 NLRC3Q7RTR2 1065 aa7.59□□□□□ -1.19
BRCA1-229ENST00000621897 METTL16Q86W50 562 aaKnown RBP7.59□□□□□ -1.19
BRCA1-229ENST00000621897 TMEM40Q8WWA1 233 aa7.59□□□□□ -1.19
BRCA1-229ENST00000621897 TRIT1Q9H3H1 467 aaKnown RBP7.59□□□□□ -1.19
BRCA1-229ENST00000621897 GPATCH2Q9NW75 528 aa7.59□□□□□ -1.19
BRCA1-229ENST00000621897 DUSP13Q9UII6 198 aa7.59□□□□□ -1.19
BRCA1-229ENST00000621897 MEIS3P2A8K0S8 358 aa7.58□□□□□ -1.2
BRCA1-229ENST00000621897 NME1P15531 152 aaKnown RBP7.57□□□□□ -1.2
BRCA1-229ENST00000621897 GDNFP39905 211 aa7.57□□□□□ -1.2
BRCA1-229ENST00000621897 SNW1Q13573 536 aaKnown RBP7.57□□□□□ -1.2
BRCA1-229ENST00000621897 NBPF12Q5TAG4 269 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-229ENST00000621897 ZNF512BQ96KM6 892 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-229ENST00000621897 ZNRF3Q9ULT6 936 aa7.57□□□□□ -1.2
BRCA1-229ENST00000621897 PCDHA11Q9Y5I1 949 aa7.57□□□□□ -1.2
BRCA1-229ENST00000621897 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-229ENST00000621897 ERVFC1P60507 584 aa7.56□□□□□ -1.2
BRCA1-229ENST00000621897 HDLBPQ00341 1268 aaKnown RBP7.56□□□□□ -1.2
BRCA1-229ENST00000621897 EGR3Q06889 387 aa7.56□□□□□ -1.2
BRCA1-229ENST00000621897 C9orf131Q5VYM1 1079 aa7.56□□□□□ -1.2
BRCA1-229ENST00000621897 TTC6Q86TZ1 520 aa7.56□□□□□ -1.2
BRCA1-229ENST00000621897 ZSWIM9Q86XI8 627 aa7.56□□□□□ -1.2
BRCA1-229ENST00000621897 TMEM192Q8IY95 271 aa7.56□□□□□ -1.2
BRCA1-229ENST00000621897 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-229ENST00000621897 ADAMTS10Q9H324 1103 aa7.56□□□□□ -1.2
BRCA1-229ENST00000621897 GOLGA2P5Q9HBQ8 144 aa7.56□□□□□ -1.2
BRCA1-229ENST00000621897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-229ENST00000621897 TMEM59LQ9UK28 342 aa7.56□□□□□ -1.2
BRCA1-229ENST00000621897 ZNF503-AS2A6NEH8 195 aa7.55□□□□□ -1.2
BRCA1-229ENST00000621897 TNFRSF10CO14798 259 aa7.55□□□□□ -1.2
BRCA1-229ENST00000621897 LTKP29376 864 aa7.55□□□□□ -1.2
BRCA1-229ENST00000621897 CHMP4BP1P59074 171 aa7.55□□□□□ -1.2
BRCA1-229ENST00000621897 TMC3Q7Z5M5 1100 aa7.55□□□□□ -1.2
BRCA1-229ENST00000621897 SLC9A7Q96T83 725 aa7.55□□□□□ -1.2
BRCA1-229ENST00000621897 FAM86C2PA6NEL3 165 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 ACRP10323 421 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 AFMP43652 599 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 HK2P52789 917 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 RNF4P78317 190 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 PAK2Q13177 524 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 NMIQ13287 307 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-229ENST00000621897 KCNMB1Q16558 191 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 LRRFIP1Q32MZ4 808 aaKnown RBP7.54□□□□□ -1.2
BRCA1-229ENST00000621897 NBPF9Q3BBW0 867 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 POU5F2Q8N7G0 328 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 KIRREL1Q96J84 757 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 SLC6A18Q96N87 628 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 HDAC8Q9BY41 377 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 PPT2Q9UMR5 302 aa7.54□□□□□ -1.2
BRCA1-229ENST00000621897 CLEC3AO75596 197 aa7.53□□□□□ -1.2
BRCA1-229ENST00000621897 CLEC16AQ2KHT3 1053 aa7.53□□□□□ -1.2
BRCA1-229ENST00000621897 NT5DC4Q86YG4 428 aa7.53□□□□□ -1.2
BRCA1-229ENST00000621897 ZNF654Q8IZM8 581 aa7.53□□□□□ -1.2
BRCA1-229ENST00000621897 LIN37Q96GY3 246 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-229ENST00000621897 FERD3LQ96RJ6 166 aa7.53□□□□□ -1.2
BRCA1-229ENST00000621897 ZGLP1P0C6A0 271 aa7.52□□□□□ -1.21
BRCA1-229ENST00000621897 CCNFP41002 786 aa7.52□□□□□ -1.21
BRCA1-229ENST00000621897 TEKQ02763 1124 aa7.52□□□□□ -1.21
BRCA1-229ENST00000621897 SP110Q9HB58 689 aa7.52□□□□□ -1.21
BRCA1-229ENST00000621897 GINM1Q9NU53 330 aa7.52□□□□□ -1.21
BRCA1-229ENST00000621897 EBF1Q9UH73 591 aa7.52□□□□□ -1.21
BRCA1-229ENST00000621897 MINPP1Q9UNW1 487 aa7.52□□□□□ -1.21
BRCA1-229ENST00000621897 GLI1P08151 1106 aa7.51□□□□□ -1.21
BRCA1-229ENST00000621897 RAD51AP2Q09MP3 1159 aa7.51□□□□□ -1.21
BRCA1-229ENST00000621897 ZNF648Q5T619 568 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-229ENST00000621897 FBXW10Q5XX13 1052 aa7.51□□□□□ -1.21
BRCA1-229ENST00000621897 RUFY4Q6ZNE9 571 aa7.51□□□□□ -1.21
BRCA1-229ENST00000621897 SYTL5Q8TDW5 730 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-229ENST00000621897 CCDC120Q96HB5 630 aa7.51□□□□□ -1.21
BRCA1-229ENST00000621897 PRDM14Q9GZV8 571 aa7.51□□□□□ -1.21
BRCA1-229ENST00000621897 PRAMEF1O95521 474 aa7.5□□□□□ -1.21
BRCA1-229ENST00000621897 HPXP02790 462 aa7.5□□□□□ -1.21
BRCA1-229ENST00000621897 TRHRP34981 398 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-229ENST00000621897 LCE3BQ5TA77 95 aa7.5□□□□□ -1.21
BRCA1-229ENST00000621897 CCDC81Q6ZN84 652 aa7.5□□□□□ -1.21
BRCA1-229ENST00000621897 USHBP1Q8N6Y0 703 aa7.5□□□□□ -1.21
BRCA1-229ENST00000621897 TCTN2Q96GX1 697 aa7.5□□□□□ -1.21
BRCA1-229ENST00000621897 MKRN2Q9H000 416 aaKnown RBP7.5□□□□□ -1.21
BRCA1-229ENST00000621897 ASCC2Q9H1I8 757 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-229ENST00000621897 C9IYK1 514 aa7.49□□□□□ -1.21
BRCA1-229ENST00000621897 IMPDH2P12268 514 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms