RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MTIF3Q9H2K0 278 aaKnown RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 PRDM5Q9NQX1 630 aaPredicted RBP7.91□□□□□ -1.14
COLCA1-205ENST00000620864 CEP170Q5SW79 1584 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 PEX19P40855 299 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 SLC12A2P55011 1212 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 PICALMQ13492 652 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 ASIC2Q16515 512 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 TSC22D3Q99576 134 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 LLPHQ9BRT6 129 aaKnown RBP7.9□□□□□ -1.14
COLCA1-205ENST00000620864 GDPD2Q9HCC8 539 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 DIABLOQ9NR28 239 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 ADAMTS12P58397 1594 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 GNA14O95837 355 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 IGFBP4P22692 258 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 ASPHQ12797 758 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 FAM122AQ96E09 287 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 PBRM1Q86U86 1689 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 TNFAIP3P21580 790 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 ELF2Q15723 593 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 CCDC197Q8NCU1 140 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 RABEP2Q9H5N1 569 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 TMOD4Q9NZQ9 345 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 ANKFY1Q9P2R3 1169 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 TBX22Q9Y458 520 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 TSPY2A6NKD2 308 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 ZNF500O60304 480 aaPredicted RBP7.9□□□□□ -1.14
COLCA1-205ENST00000620864 SNRPA1P09661 255 aaKnown RBP7.9□□□□□ -1.14
COLCA1-205ENST00000620864 PPIP5K1Q6PFW1 1433 aa7.9□□□□□ -1.14
COLCA1-205ENST00000620864 H7C1D1 291 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 MAP3K7O43318 606 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 SERPINI2O75830 405 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 TNNI2P48788 182 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 APOBRQ0VD83 1088 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 GRAMD4Q6IC98 578 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 SEPT12Q8IYM1 358 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 FAM212AQ96EL1 285 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 HAUS7Q99871 368 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 ASIC3Q9UHC3 531 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 FRMD3A2A2Y4 597 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 GNGT1P63211 74 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 MICU3Q86XE3 530 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 PACSIN2Q9UNF0 486 aaPredicted RBP7.9□□□□□ -1.15
COLCA1-205ENST00000620864 EXOC7Q9UPT5 735 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 TTC41PQ6P2S7 1318 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 PIK3R4Q99570 1358 aa7.9□□□□□ -1.15
COLCA1-205ENST00000620864 THOC2Q8NI27 1593 aaKnown RBP7.9□□□□□ -1.15
COLCA1-205ENST00000620864 CSPG5O95196 566 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 EEF1DP29692 281 aaKnown RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 OCA2Q04671 838 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 PPP2R5AQ15172 486 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 RPS6KA1Q15418 735 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 BRDTQ58F21 947 aaPredicted RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 DTHD1Q6ZMT9 781 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 GDAP1L1Q96MZ0 367 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 SH3GL3Q99963 347 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 MIS12Q9H081 205 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 TPCN1Q9ULQ1 816 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 STK38LQ9Y2H1 464 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 PRXQ9BXM0 1461 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 CTNNA1P35221 906 aaKnown RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 IFIT1BQ5T764 474 aaKnown RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 CFAP61Q8NHU2 1237 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 SAAL1Q96ER3 474 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 NOC2LQ9Y3T9 749 aaKnown RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 SART1O43290 800 aaKnown RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 CCT6AP40227 531 aaKnown RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 NSMCE1Q8WV22 266 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 PCDH11XQ9BZA7 1347 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 PCDH11YQ9BZA8 1340 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 ZNF75DP51815 510 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 ATP6V0A1Q93050 837 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 DCPSQ96C86 337 aaKnown RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 TRIM15Q9C019 465 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 RIC8AQ9NPQ8 531 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 SAR1BQ9Y6B6 198 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 TMEM94Q12767 1356 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 KLF18A0A0U1RQI7 1052 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 BCRP11274 1271 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 IL9RQ01113 521 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 TRIML1Q8N9V2 468 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 OLFM3Q96PB7 478 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 IWS1Q96ST2 819 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 THUMPD2Q9BTF0 503 aaKnown RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 NOC4LQ9BVI4 516 aaKnown RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 MYO1AQ9UBC5 1043 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 DBF4Q9UBU7 674 aaPredicted RBP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 FAM50BQ9Y247 325 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 ATP5HO75947 161 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 MAP7D3Q8IWC1 876 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 FLAD1Q8NFF5 587 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 RALGAPBQ86X10 1494 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 TTC21BQ7Z4L5 1316 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 DKC1O60832 514 aaKnown RBP eCLIP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 NONOQ15233 471 aaKnown RBP eCLIP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 KMT5BQ4FZB7 885 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 SERPINI1Q99574 410 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 CARD6Q9BX69 1037 aa7.89□□□□□ -1.15
COLCA1-205ENST00000620864 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.89□□□□□ -1.15
COLCA1-205ENST00000620864 SCHIP1Q9P0W5 487 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms