RNA–Protein interactions for RNA: ENST00000618921.4

CBWD3-214, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-214ENST00000618921 PRKAR2AP13861 404 aaKnown RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 ATP2B4P23634 1241 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 TOB2Q14106 344 aaPredicted RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 TMC4Q7Z404 712 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 ZNF589Q86UQ0 364 aaPredicted RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 CACTIN-AS1Q8N1I8 211 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 SDR16C5Q8N3Y7 309 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 KBTBD3Q8NAB2 608 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 SLAIN1Q8ND83 568 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 TSC1Q92574 1164 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 CELF1Q92879 486 aaKnown RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 NEK1Q96PY6 1258 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 YY1AP1Q9H869 796 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 HELLSQ9NRZ9 838 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 GNL3LQ9NVN8 582 aaKnown RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 CWC25Q9NXE8 425 aaPredicted RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 ANKRD36CQ5JPF3 1778 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 ATP5J2-PTCD1G3V325 749 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 FKTNO75072 461 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 CCDC192P0DO97 292 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 IL15P40933 162 aaPredicted RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 PPP4CP60510 307 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 HDLBPQ00341 1268 aaKnown RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 TCEAL1Q15170 157 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 LMBR1LQ6UX01 489 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 C11orf96Q7Z7L8 435 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 CEP120Q8N960 986 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 PIK3R5Q8WYR1 880 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 CLP1Q92989 425 aaKnown RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 DBNDD2Q9BQY9 259 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 FUCA2Q9BTY2 467 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 ZC3H12CQ9C0D7 883 aaKnown RBP8.07□□□□□ -1.12
CBWD3-214ENST00000618921 PIF1Q9H611 641 aa8.07□□□□□ -1.12
CBWD3-214ENST00000618921 LAMB2P55268 1798 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 DUOX1Q9NRD9 1551 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 RANBP2P49792 3224 aaKnown RBP8.06□□□□□ -1.12
CBWD3-214ENST00000618921 ZNF609O15014 1411 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L3A6NCW0 530 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L4A6NCW7 530 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 PIK3CDO00329 1044 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 CIAO1O76071 339 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 TPM3P06753 285 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 ZNF280AP59817 542 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-214ENST00000618921 FOXO4P98177 505 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 TCIRG1Q13488 830 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 LRRFIP1Q32MZ4 808 aaKnown RBP8.06□□□□□ -1.12
CBWD3-214ENST00000618921 CCDC144BQ3MJ40 725 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L2Q6R6M4 530 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L1Q7RTZ2 530 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 TBC1D16Q8TBP0 767 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 GTF3C6Q969F1 213 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 LLPHQ9BRT6 129 aaKnown RBP8.06□□□□□ -1.12
CBWD3-214ENST00000618921 PCDHGA10Q9Y5H3 936 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 SCN9AQ15858 1988 aa8.06□□□□□ -1.12
CBWD3-214ENST00000618921 FAM196BA6NMK8 535 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L15C9J2P7 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L10C9JJH3 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L13C9JLJ4 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L12C9JPN9 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L11C9JVI0 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L21D6R901 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L18D6R9N7 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L22D6RA61 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L17D6RBQ6 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L19D6RCP7 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L20D6RJB6 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 KIF4AO95239 1232 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 GYS2P54840 703 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP17L24Q0WX57 530 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 CRTC2Q53ET0 693 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 CCDC191Q8NCU4 936 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 JARID2Q92833 1246 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 EYA3Q99504 573 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 DSCC1Q9BVC3 393 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 ZSCAN16Q9H4T2 348 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 DDX19AQ9NUU7 478 aaKnown RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 CHMP3Q9Y3E7 222 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 KIF3AQ9Y496 699 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 CUL9Q8IWT3 2517 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 GOLGA6L4A6NEF3 574 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 ADCY5O95622 1261 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 APPP05067 770 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 BDNFP23560 247 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 MAPK1P28482 360 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 SF3B3Q15393 1217 aaKnown RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 MAP3K11Q16584 847 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 HSP90AB3PQ58FF7 597 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 DNTTIP2Q5QJE6 756 aaKnown RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 Q6ZUG5 572 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 TTC6Q86TZ1 520 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 HELBQ8NG08 1087 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 EDC3Q96F86 508 aaKnown RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 FAM89AQ96GI7 184 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 TMEM121BQ9BXQ6 578 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 NUP62CLQ9H1M0 184 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 PAG1Q9NWQ8 432 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 USP25Q9UHP3 1055 aa8.05□□□□□ -1.12
CBWD3-214ENST00000618921 COLQQ9Y215 455 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-214ENST00000618921 SPEF2Q9C093 1822 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms